RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 FXYD5Q96DB9 178 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 SGK494Q96LW2 274 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 TREM1Q9NP99 234 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 CCDC59Q9P031 241 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 TRBV25-1A0A075B6N4 114 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 IGHV1-58A0A0C4DH39 117 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 M0QXV9 152 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 SCGB1D2O95969 90 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 METTL15P1P0C7V9 234 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 SCGB2B2Q4G0G5 96 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 RNASE10Q5GAN6 216 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 TMEM14EPQ6UXP3 125 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 SNX29P2Q8IUI4 249 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 S100A16Q96FQ6 103 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 ZNF471Q9BX82 626 aaPredicted RBP3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 SLIRPQ9GZT3 109 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 MGAT4CQ9UBM8 478 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 GPR132Q9UNW8 380 aa3.51□□□□□ -1.85
CTNNA1-216ENST00000519489 IGHV1-24A0A0C4DH33 117 aa3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 FNDC10F2Z333 226 aa3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 RANP62826 216 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 ZFP1Q6P2D0 407 aa3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 MIR17HGQ75NE6 70 aa3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 CIB3Q96Q77 187 aaPredicted RBP3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 SCN3BQ9NY72 215 aa3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
CTNNA1-216ENST00000519489 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 H3BVH4 76 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 TBPP20226 339 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 XCL1P47992 114 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 CAMLGP49069 296 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 SAMD12Q8N8I0 201 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 PSG8Q9UQ74 426 aa3.49□□□□□ -1.85
CTNNA1-216ENST00000519489 GCGP01275 180 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 MT3P25713 68 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 UBE2NLQ5JXB2 153 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 GOLT1AQ6ZVE7 132 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 KRTAP13-1Q8IUC0 172 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 OR5A1Q8NGJ0 315 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 OR1L4Q8NGR5 311 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 PSENENQ9NZ42 101 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 IL36BQ9NZH7 164 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 C14orf166Q9Y224 244 aaKnown RBP3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
CTNNA1-216ENST00000519489 IGLV5-39A0A0G2JS06 123 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 LOC100506127A0A0U1RQW1 187 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 BCL2L11O43521 198 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 MED6O75586 246 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 ARMS2P0C7Q2 107 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 TGFBR1P36897 503 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 CSN1S1P47710 185 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 GNG5P63218 68 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 Q6Q795 121 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 Q6ZRG5 221 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 HYLS1Q96M11 299 aa3.47□□□□□ -1.85
CTNNA1-216ENST00000519489 GRIFINA4D1Z8 144 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 M0R381 172 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 CCL25O15444 150 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 SLC25A6P12236 298 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 FGF7P21781 194 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 RPL28P46779 137 aaKnown RBP3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 RAB4BP61018 213 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 TMEM97Q5BJF2 176 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 C9orf129Q5T035 196 aaKnown RBP3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 SPAG11AQ6PDA7 123 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 C12orf45Q8N5I9 185 aaPredicted RBP3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 CAMK2N2Q96S95 79 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 TMEM243Q9BU79 118 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 S100A14Q9HCY8 104 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 RABL2BQ9UNT1 228 aa3.46□□□□□ -1.86
CTNNA1-216ENST00000519489 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 C19orf71A6NCJ1 209 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 BCE1O60756 84 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 RAB3DO95716 219 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 SPRR2EP22531 72 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 S100A4P26447 101 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 SPRR2BP35325 72 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 SPRR2AP35326 72 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 RPL29P47914 159 aaKnown RBP3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 GAGE2EQ4V326 116 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 Q8N377 158 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 OR11H4Q8NGC9 324 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 SMIM8Q96KF7 97 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 PFDN5Q99471 154 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 NMES1Q9C002 83 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 OR5AC2Q9NZP5 309 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 RABL2AQ9UBK7 228 aaPredicted RBP3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 GAGE2DQ9UEU5 116 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 TPRKBQ9Y3C4 175 aa3.45□□□□□ -1.86
CTNNA1-216ENST00000519489 SSSCA1O60232 199 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 NUPR1O60356 82 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 ZNF56Q15929 161 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 OR5C1Q8NGR4 320 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 MTFP1Q9UDX5 166 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 FLVCR2Q9UPI3 526 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 WDR83OSQ9Y284 106 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 KCNIP3Q9Y2W7 256 aa3.44□□□□□ -1.86
CTNNA1-216ENST00000519489 LINC00959A0A1B0GUT2 108 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms