RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 FAM222AQ5U5X8 452 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 CEMP1Q6PRD7 247 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-206ENST00000519115 Q6ZTC4 211 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 AMN1Q8IY45 258 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 LINC00612Q8N6U2 182 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 C18orf32Q8TCD1 76 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 PRELID3AQ96N28 172 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 MSRB1Q9NZV6 116 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 STARD9Q9P2P6 4700 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 FAM229AH3BQW9 127 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 RS1O15537 224 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 LINC00614P0C842 121 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 AZU1P20160 251 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 NDUFA6P56556 154 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 SNRPEP62304 92 aaKnown RBP5.39□□□□□ -1.55
SDCBP-206ENST00000519115 C12orf74Q32Q52 190 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 UFSP1Q6NVU6 142 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 BAGE3Q86Y29 109 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 DNAJC30Q96LL9 226 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 DKK2Q9UBU2 259 aa5.39□□□□□ -1.55
SDCBP-206ENST00000519115 TRAV4A0A0B4J268 109 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 TRBV10-1A0A0K0K1A3 114 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 LCE6AA0A183 80 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 PLAC8L1A1L4L8 177 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 D6R8Y8 96 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 IGHV3-53P01767 116 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 SPART-AS1P0CW21 52 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 AKR1D1P51857 326 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 CFAP126Q5VTH2 177 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 NIT1Q86X76 327 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-206ENST00000519115 NIT2Q9NQR4 276 aa5.38□□□□□ -1.55
SDCBP-206ENST00000519115 KLK5Q9Y337 293 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-206ENST00000519115 TRAV10A0A0B4J240 114 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 TRBV27A0A0K0K1C4 114 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 IGLL5B9A064 214 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 M0QY20 66 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 VCYO14598 125 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 HTN3P15516 51 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 S100A2P29034 98 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 POLR2KP53803 58 aaKnown RBP5.37□□□□□ -1.55
SDCBP-206ENST00000519115 DAD1P61803 113 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 KIAA1644Q3SXP7 199 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 HIST3H2BBQ8N257 126 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 Q8N8P6 123 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 NRACQ8N912 160 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 PRSS3P2Q8NHM4 247 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 MAP1LC3AQ9H492 121 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 AP5S1Q9NUS5 200 aa5.37□□□□□ -1.55
SDCBP-206ENST00000519115 DEFB131BA0A096LNP1 70 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 LOC105371267A0A1B0GV96 52 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 TRBV6-4A0A1B0GX49 114 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 DEFB130BP0DP73 79 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 DEFB130AP0DP74 79 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 SUMO2P61956 95 aaKnown RBP5.36□□□□□ -1.55
SDCBP-206ENST00000519115 ORMDL2Q53FV1 153 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 OR4C5Q8NGB2 326 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 NOP10Q9NPE3 64 aaKnown RBP5.36□□□□□ -1.55
SDCBP-206ENST00000519115 MUC4Q99102 2169 aa5.36□□□□□ -1.55
SDCBP-206ENST00000519115 NACAE9PAV3 2078 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 IGLV2-18A0A075B6J9 118 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 MUC21A0A0G2JKD1 596 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 MUC21A0A140T8X8 626 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 HSBP1O75506 76 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 SERF1AO75920 110 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 LY6G6CO95867 125 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 NPSP0C0P6 89 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 FA2HQ7L5A8 372 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 SPATA12Q7Z6I5 190 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 LINC00476Q8WZB0 136 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
SDCBP-206ENST00000519115 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
SDCBP-206ENST00000519115 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 F5H697 171 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 NCR2O95944 276 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 NPYP01303 97 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 LINC00310P59036 64 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 LAGE3Q14657 143 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 TMEM97Q5BJF2 176 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 KIR2DL4Q99706 377 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 HIST1H2BLQ99880 126 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 SMIM2Q9BVW6 85 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 HSPB8Q9UJY1 196 aa5.34□□□□□ -1.55
SDCBP-206ENST00000519115 ALMS1Q8TCU4 4167 aa5.34□□□□□ -1.56
SDCBP-206ENST00000519115 TRGV2A0A075B6R0 118 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 GAGE12BA1L429 117 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 H3BNG1 76 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 GAGE7O76087 117 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 GAGE12FP0CL80 117 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 GAGE12GP0CL81 117 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 GAGE12IP0CL82 117 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 GATA1P15976 413 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-206ENST00000519115 FCER1GP30273 86 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 IFI27P40305 119 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-206ENST00000519115 SSTP61278 116 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
SDCBP-206ENST00000519115 Q6ZTI0 123 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms