RNA–Protein interactions for RNA: ENST00000518872.1

SYNPO-203, Transcript of synaptopodin, humanhuman

TSL 5

Gene SYNPO, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-203ENST00000518872 hCG_2014768A0A024R1R8 64 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 A0A087WX48 190 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 IGLV5-52A0A0A0MRZ9 124 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 RBFOX3A6NFN3 312 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 F5H697 171 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 ELOBQ15370 118 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.7■□□□□ 0.74
SYNPO-203ENST00000518872 RMI2Q96E14 147 aa19.7■□□□□ 0.74
SYNPO-203ENST00000518872 BLOC1S1P78537 153 aa19.69■□□□□ 0.74
SYNPO-203ENST00000518872 LYPD6BQ8NI32 183 aa19.69■□□□□ 0.74
SYNPO-203ENST00000518872 TMEM97Q5BJF2 176 aa19.68■□□□□ 0.74
SYNPO-203ENST00000518872 SSTP61278 116 aa19.67■□□□□ 0.74
SYNPO-203ENST00000518872 KCNIP4Q6PIL6 250 aa19.67■□□□□ 0.74
SYNPO-203ENST00000518872 ATRAIDQ6UW56 229 aa19.67■□□□□ 0.74
SYNPO-203ENST00000518872 ALKAL2Q6UX46 152 aa19.67■□□□□ 0.74
SYNPO-203ENST00000518872 TPPP3Q9BW30 176 aa19.67■□□□□ 0.74
SYNPO-203ENST00000518872 KLK12Q9UKR0 248 aa19.67■□□□□ 0.74
SYNPO-203ENST00000518872 TMEM250H0YL14 139 aa19.65■□□□□ 0.74
SYNPO-203ENST00000518872 PKIAP61925 76 aa19.65■□□□□ 0.74
SYNPO-203ENST00000518872 WFDC2Q14508 124 aa19.65■□□□□ 0.74
SYNPO-203ENST00000518872 WDR73Q6P4I2 378 aa19.65■□□□□ 0.74
SYNPO-203ENST00000518872 NUDT10Q8NFP7 164 aa19.65■□□□□ 0.74
SYNPO-203ENST00000518872 NUDT11Q96G61 164 aa19.65■□□□□ 0.74
SYNPO-203ENST00000518872 H7C1H1 209 aa19.64■□□□□ 0.73
SYNPO-203ENST00000518872 M0QY20 66 aa19.64■□□□□ 0.73
SYNPO-203ENST00000518872 CTRLP40313 264 aa19.64■□□□□ 0.73
SYNPO-203ENST00000518872 DNAJC30Q96LL9 226 aa19.64■□□□□ 0.73
SYNPO-203ENST00000518872 TMEM70Q9BUB7 260 aa19.64■□□□□ 0.73
SYNPO-203ENST00000518872 CNFNQ9BYD5 112 aa19.64■□□□□ 0.73
SYNPO-203ENST00000518872 TRGC1P0CF51 173 aa19.63■□□□□ 0.73
SYNPO-203ENST00000518872 Q0VG73 95 aa19.63■□□□□ 0.73
SYNPO-203ENST00000518872 LYZL1Q6UWQ5 148 aa19.63■□□□□ 0.73
SYNPO-203ENST00000518872 OCC1Q8TAD7 63 aa19.62■□□□□ 0.73
SYNPO-203ENST00000518872 UBE2WQ96B02 151 aa19.62■□□□□ 0.73
SYNPO-203ENST00000518872 K7EN84 100 aa19.61■□□□□ 0.73
SYNPO-203ENST00000518872 NTM-AS1Q6ZSK4 140 aa19.61■□□□□ 0.73
SYNPO-203ENST00000518872 SUMO4Q6EEV6 95 aa19.6■□□□□ 0.73
SYNPO-203ENST00000518872 RPP21Q9H633 154 aaKnown RBP19.6■□□□□ 0.73
SYNPO-203ENST00000518872 IGKV2D-24A0A075B6R9 120 aa19.59■□□□□ 0.73
SYNPO-203ENST00000518872 TMEM262E9PQX1 116 aa19.59■□□□□ 0.73
SYNPO-203ENST00000518872 NDUFS6O75380 124 aaKnown RBP19.59■□□□□ 0.73
SYNPO-203ENST00000518872 MGPP08493 103 aa19.59■□□□□ 0.73
SYNPO-203ENST00000518872 NTF3P20783 257 aa19.59■□□□□ 0.73
SYNPO-203ENST00000518872 MPV17L2Q567V2 206 aa19.59■□□□□ 0.73
SYNPO-203ENST00000518872 DPH3P1Q9H4G8 78 aa19.59■□□□□ 0.73
SYNPO-203ENST00000518872 EPM2AB3EWF7 344 aa19.58■□□□□ 0.72
SYNPO-203ENST00000518872 IQCJQ1A5X6 159 aa19.57■□□□□ 0.72
SYNPO-203ENST00000518872 BAALCQ8WXS3 180 aa19.57■□□□□ 0.72
SYNPO-203ENST00000518872 CHCHD5Q9BSY4 110 aa19.57■□□□□ 0.72
SYNPO-203ENST00000518872 RNASE7Q9H1E1 156 aaKnown RBP19.57■□□□□ 0.72
SYNPO-203ENST00000518872 RASL11AQ6T310 242 aa19.56■□□□□ 0.72
SYNPO-203ENST00000518872 FAT1Q14517 4588 aa19.56■□□□□ 0.72
SYNPO-203ENST00000518872 TRBV25-1A0A075B6N4 114 aa19.55■□□□□ 0.72
SYNPO-203ENST00000518872 LECT2O14960 151 aa19.55■□□□□ 0.72
SYNPO-203ENST00000518872 ENHOQ6UWT2 76 aa19.55■□□□□ 0.72
SYNPO-203ENST00000518872 Q8N976 141 aa19.55■□□□□ 0.72
SYNPO-203ENST00000518872 FAM231DQ6ZW35 169 aa19.54■□□□□ 0.72
SYNPO-203ENST00000518872 CRPP02741 224 aa19.53■□□□□ 0.72
SYNPO-203ENST00000518872 C15orf54Q8N8G6 183 aa19.53■□□□□ 0.72
SYNPO-203ENST00000518872 C1orf43Q9BWL3 253 aa19.53■□□□□ 0.72
SYNPO-203ENST00000518872 FRZBQ92765 325 aa19.52■□□□□ 0.72
SYNPO-203ENST00000518872 NIT2Q9NQR4 276 aa19.52■□□□□ 0.72
SYNPO-203ENST00000518872 DNAH8Q96JB1 4490 aa19.52■□□□□ 0.72
SYNPO-203ENST00000518872 IGHV1-24A0A0C4DH33 117 aa19.51■□□□□ 0.71
SYNPO-203ENST00000518872 ANGP03950 147 aaKnown RBP19.51■□□□□ 0.71
SYNPO-203ENST00000518872 MIAQ16674 131 aa19.51■□□□□ 0.71
SYNPO-203ENST00000518872 PGLYRP4Q96LB8 373 aa19.51■□□□□ 0.71
SYNPO-203ENST00000518872 PRR34Q9NV39 138 aa19.51■□□□□ 0.71
SYNPO-203ENST00000518872 NKX2-5P52952 324 aaPredicted RBP19.5■□□□□ 0.71
SYNPO-203ENST00000518872 TWIST1Q15672 202 aa19.5■□□□□ 0.71
SYNPO-203ENST00000518872 Q6ZSA8 131 aa19.5■□□□□ 0.71
SYNPO-203ENST00000518872 GTSF1Q8WW33 167 aa19.5■□□□□ 0.71
SYNPO-203ENST00000518872 RBX1P62877 108 aa19.49■□□□□ 0.71
SYNPO-203ENST00000518872 CT83Q5H943 113 aa19.49■□□□□ 0.71
SYNPO-203ENST00000518872 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.48■□□□□ 0.71
SYNPO-203ENST00000518872 A0A1B0GVG6 124 aa19.48■□□□□ 0.71
SYNPO-203ENST00000518872 Q5VSD8 79 aa19.48■□□□□ 0.71
SYNPO-203ENST00000518872 FAM210AQ96ND0 272 aa19.48■□□□□ 0.71
SYNPO-203ENST00000518872 FAM30AQ9NZY2 134 aa19.48■□□□□ 0.71
SYNPO-203ENST00000518872 A8MWL6 223 aa19.47■□□□□ 0.71
SYNPO-203ENST00000518872 GATCO43716 136 aaKnown RBP19.47■□□□□ 0.71
SYNPO-203ENST00000518872 GAGE6Q13070 117 aa19.47■□□□□ 0.71
SYNPO-203ENST00000518872 FOXA3P55318 350 aaPredicted RBP19.46■□□□□ 0.71
SYNPO-203ENST00000518872 C14orf177Q52M58 125 aa19.46■□□□□ 0.71
SYNPO-203ENST00000518872 EIF5A2Q9GZV4 153 aaKnown RBP19.46■□□□□ 0.71
SYNPO-203ENST00000518872 A0A1B0GUV1 79 aa19.44■□□□□ 0.7
SYNPO-203ENST00000518872 SMIM7Q9BQ49 75 aa19.44■□□□□ 0.7
SYNPO-203ENST00000518872 GATD1Q8NB37 220 aa19.43■□□□□ 0.7
SYNPO-203ENST00000518872 TMEM243Q9BU79 118 aa19.43■□□□□ 0.7
SYNPO-203ENST00000518872 CEBPGP53567 150 aa19.42■□□□□ 0.7
SYNPO-203ENST00000518872 SMIM15Q7Z3B0 74 aa19.42■□□□□ 0.7
SYNPO-203ENST00000518872 LINC01551Q86U37 167 aa19.42■□□□□ 0.7
SYNPO-203ENST00000518872 VPS13BQ7Z7G8 4022 aa19.41■□□□□ 0.7
SYNPO-203ENST00000518872 SMR3BP02814 79 aaPredicted RBP19.41■□□□□ 0.7
SYNPO-203ENST00000518872 SRP19P09132 144 aaKnown RBP19.41■□□□□ 0.7
SYNPO-203ENST00000518872 HAMPP81172 84 aa19.41■□□□□ 0.7
SYNPO-203ENST00000518872 LINC00269Q8N2A0 174 aa19.41■□□□□ 0.7
SYNPO-203ENST00000518872 KRTAP26-1Q6PEX3 210 aa19.4■□□□□ 0.7
SYNPO-203ENST00000518872 TEX261Q6UWH6 196 aa19.4■□□□□ 0.7
SYNPO-203ENST00000518872 ZNF727A8MUV8 499 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms