RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 RHODO00212 210 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BKO60814 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 CFDP00746 253 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-207ENST00000518716 OXTP01178 125 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 PRM2P04554 102 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BJP06899 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 IFITM1P13164 125 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BOP23527 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BBP33778 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 SDC2P34741 201 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 FUSP35637 526 aaKnown RBP eCLIP4.11□□□□□ -1.75
PABPC1-207ENST00000518716 GALR1P47211 349 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 FXYD7P58549 80 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BDP58876 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 YPEL3P61236 119 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BCP62807 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 ERHP84090 104 aaKnown RBP4.11□□□□□ -1.75
PABPC1-207ENST00000518716 IL15RAQ13261 267 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 LAGE3Q14657 143 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST2H2BEQ16778 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 TIGITQ495A1 244 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-207ENST00000518716 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 STPG4Q8N801 248 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 PRR26Q8N8Z3 221 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 OR10J6PQ8NGY7 276 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BHQ93079 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 SLC25A38Q96DW6 304 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 FMC1Q96HJ9 113 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 C17orf77Q96MU5 243 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 AQP10Q96PS8 301 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BNQ99877 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 HIST1H2BMQ99879 126 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 RNASE7Q9H1E1 156 aaKnown RBP4.11□□□□□ -1.75
PABPC1-207ENST00000518716 SLC35B3Q9H1N7 401 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 PARLQ9H300 379 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 FUT9Q9Y231 359 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 TRAV26-2A0A0B4J265 109 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 A0A1B0GWB2 263 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 ISLRO14498 428 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
PABPC1-207ENST00000518716 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 TSPOP30536 169 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 RPS10P46783 165 aaKnown RBP4.1□□□□□ -1.75
PABPC1-207ENST00000518716 NDUFV3P56181 108 aaKnown RBP4.1□□□□□ -1.75
PABPC1-207ENST00000518716 TMEM258P61165 79 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 SEC11AP67812 179 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 ADIRFQ15847 76 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 ESRGQ1W209 222 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 RRN3P1Q2M238 152 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 LCN15Q6UWW0 184 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 Q6ZN92 141 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 RASL10AQ92737 203 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 TMEM230Q96A57 120 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 RTBDNQ9BSG5 229 aaPredicted RBP4.1□□□□□ -1.75
PABPC1-207ENST00000518716 FXYD6Q9H0Q3 95 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 JPT2Q9H910 190 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 NDUFB11Q9NX14 153 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 PKIGQ9Y2B9 76 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 TNXBP22105 4242 aa4.1□□□□□ -1.75
PABPC1-207ENST00000518716 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 A0A0J9YX75 114 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 K7EP34 96 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 IGKV1-5P01602 117 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 P01737 135 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 ELK1P19419 428 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 LINC00315P59091 139 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 ZNF345Q14585 488 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 SPINK9Q5DT21 86 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 LYRM7Q5U5X0 104 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 LINC00612Q8N6U2 182 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 PRSS3P2Q8NHM4 247 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 IGF2BP2-AS1Q96M15 143 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 RPS10P5Q9NQ39 176 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 KCNIP2Q9NS61 270 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
PABPC1-207ENST00000518716 TRBV19A0A075B6N1 114 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 F6UB75 175 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 TMEM250H0YL14 139 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 IGLC6P0CF74 106 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 DEFB130BP0DP73 79 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 DEFB130AP0DP74 79 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 OPRK1P41145 380 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 PSMB3P49720 205 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 SUB1P53999 127 aaKnown RBP eCLIP4.08□□□□□ -1.76
PABPC1-207ENST00000518716 HERV-K104P61576 105 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 HBG1P69891 147 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 HBG2P69892 147 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 KLF9Q13886 244 aaPredicted RBP4.08□□□□□ -1.76
PABPC1-207ENST00000518716 Q6ZRU5 148 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 KLK11Q9UBX7 282 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 CACFD1Q9UGQ2 172 aa4.08□□□□□ -1.76
PABPC1-207ENST00000518716 A0A087WTM6 91 aa4.07□□□□□ -1.76
PABPC1-207ENST00000518716 TRAV8-2A0A0B4J237 113 aa4.07□□□□□ -1.76
PABPC1-207ENST00000518716 C7orf77A4D0Y5 90 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms