RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 C2orf82Q6UX34 121 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 TMED4Q7Z7H5 227 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 GDPD1Q8N9F7 314 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 DIRC1Q969H9 104 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 ZC2HC1AQ96GY0 325 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 LYSMD1Q96S90 227 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 CCDC90BQ9GZT6 254 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 TVP23BQ9NYZ1 205 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 ATP6V1DQ9Y5K8 247 aa-0.64□□□□□ -2.51
SCARNA1-201ENST00000517138 HAND1O96004 215 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 SERPINE1P05121 402 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 DEFB1P60022 68 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 ROMO1P60602 79 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 OR4B1Q8NGF8 309 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 MRPS26Q9BYN8 205 aaKnown RBP-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 GUCA1BQ9UMX6 200 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 GINS2Q9Y248 185 aa-0.65□□□□□ -2.51
SCARNA1-201ENST00000517138 TTRP02766 147 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 SMIM17P0DL12 118 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 NKX2-5P52952 324 aaPredicted RBP-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 ARPP19P56211 112 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 FXYD6P3P58550 94 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 KLKP1Q107X0 134 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 IMPG1Q17R60 797 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 OR10K1Q8NGX5 313 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 CCL4L1Q8NHW4 92 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 C8orf76Q96K31 380 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 FBXO5Q9UKT4 447 aa-0.66□□□□□ -2.52
SCARNA1-201ENST00000517138 YPEL1O60688 119 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 UQCRHP07919 91 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 SPATA45Q537H7 98 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 TEN1Q86WV5 123 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 CANT1Q8WVQ1 401 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 DCUN1D1Q96GG9 259 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 OR4C12Q96R67 309 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 TMEM133Q9H2Q1 129 aa-0.67□□□□□ -2.52
SCARNA1-201ENST00000517138 TRAV23DV6A0A075B6W5 121 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 CYB5BO43169 146 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 PPYP01298 95 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 CD14P08571 375 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 PDE6GP18545 87 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 SULT1A1P50225 295 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 C4orf22Q6V702 233 aa-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 RPS27LQ71UM5 84 aaKnown RBP-0.68□□□□□ -2.52
SCARNA1-201ENST00000517138 ZNF727A8MUV8 499 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 E7EUB6 86 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 ATP6V1G2-DDX39BF2Z307 99 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 JMJD7-PLA2G4BH0Y9G9 81 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 K7EQZ3 153 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 COX7CP15954 63 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 UBE2D3P61077 147 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 LINC01556Q5JQF7 62 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 OR5D14Q8NGL3 314 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 SLC25A40Q8TBP6 338 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 STAG3L4Q8TBR4 150 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 C2orf50Q96LR7 162 aa-0.69□□□□□ -2.52
SCARNA1-201ENST00000517138 hCG_1818297A0A087WSY0 165 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 A8MT66 165 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 HMGA1P17096 107 aaKnown RBP-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 GLRXP35754 106 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 DSCR4P56555 118 aaPredicted RBP-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 PLGLB1Q02325 96 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 KLRD1Q13241 179 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 FOXI2Q6ZQN5 318 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 PHF5AQ7RTV0 110 aaKnown RBP-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 Q86TA4 180 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 WFDC10BQ8IUB3 73 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 PXT1Q8NFP0 134 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 RNASE7Q9H1E1 156 aaKnown RBP-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 NKIRAS1Q9NYS0 192 aa-0.7□□□□□ -2.52
SCARNA1-201ENST00000517138 TRAV5A0A0B4J249 113 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 LOC107984156A0A0G2JMH3 177 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 hADV38S2A0JD32 116 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 NPFFO15130 113 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 MT-ND6P03923 174 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 FXYD4P59646 89 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 TDRG1Q3Y452 100 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 PRR15Q8IV56 129 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 ARL17AQ8IVW1 177 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 TMEM126AQ9H061 195 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 VPS29Q9UBQ0 182 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 NDUFA12Q9UI09 145 aa-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 KTN1Q86UP2 1357 aaKnown RBP-0.71□□□□□ -2.52
SCARNA1-201ENST00000517138 CD3DP04234 171 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 EIF5AP63241 154 aaKnown RBP-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 TMED1Q13445 227 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 FAM172AQ8WUF8 416 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 LINC00467Q9BRT7 94 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 GGACTQ9BVM4 153 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 BOLA2Q9H3K6 86 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 DYNLRB1Q9NP97 96 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 LY96Q9Y6Y9 160 aa-0.72□□□□□ -2.52
SCARNA1-201ENST00000517138 CLDN24A6NM45 220 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 NIPSNAP2O75323 286 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 TPM3P06753 285 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 SCTP09683 121 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 SPART-AS1P0CW21 52 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 APELAP0DMC3 54 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 CXCL8P10145 99 aa-0.73□□□□□ -2.53
SCARNA1-201ENST00000517138 ATP11AUNQ6ZP68 121 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms