RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 JOSD1Q15040 202 aaPredicted RBP5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 LINC00518Q8N0U6 118 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 RNF183Q96D59 192 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 DNAH3Q8TD57 4116 aa5.47□□□□□ -1.53
SCARNA20.1-201ENST00000516009 SDHAF1A6NFY7 115 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 VCYO14598 125 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TCAPO15273 167 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 CIDEAO60543 219 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 MIFP14174 115 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 FCER1GP30273 86 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 POLR2KP53803 58 aaKnown RBP5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 ORMDL2Q53FV1 153 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 PYY3Q5JQD4 70 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 LURAP1LQ8IV03 231 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 ZNF479Q96JC4 524 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 C12orf57Q99622 126 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TMEM70Q9BUB7 260 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 NBEAL2Q6ZNJ1 2754 aa5.46□□□□□ -1.54
SCARNA20.1-201ENST00000516009 A0A096LNJ9 63 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 IGHV4-28A0A0C4DH34 117 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TRBV27A0A0K0K1C4 114 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 LYRM9A8MSI8 78 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SCGB1D1O95968 90 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 NUDT3O95989 172 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 Q6ZSN1 163 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DNAJC30Q96LL9 226 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 KIR2DL4Q99706 377 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 MAP1LC3CQ9BXW4 147 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TP53TG1Q9Y2A0 90 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TRGV4A0A0C4DH28 118 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 I3L3M4 83 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 K7EQD1 137 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 P0DMU3 169 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 FAM231AP0DMU4 169 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 FAM231CP0DMU5 169 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DEFB130BP0DP73 79 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DEFB130AP0DP74 79 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 BTF3P20290 206 aaKnown RBP5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 G0S2P27469 103 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 RIPPLY3P57055 190 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 KPRPQ5T749 579 aaPredicted RBP5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 FAM222AQ5U5X8 452 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 LINC00173Q6ZV60 143 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 NEGR1Q7Z3B1 354 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 Q8NAQ8 132 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 NEXN-AS1Q8NBZ9 246 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 C18orf15Q96N68 181 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 NOTCH1P46531 2555 aa5.44□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TRBV10-1A0A0K0K1A3 114 aa5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DEFB4AO15263 64 aa5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 ATP5LO75964 103 aa5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 RPL36AP83881 106 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SLC25A29Q8N8R3 303 aa5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 RPL36ALQ969Q0 106 aaKnown RBP5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
SCARNA20.1-201ENST00000516009 NBEAL1Q6ZS30 2694 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TRBV7-3A0A075B6L6 115 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TRBV6-4A0A1B0GX49 114 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 C20orf202A1L168 122 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 LINC01549A6NIU2 74 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SYS1-DBNDD2H3BUS1 97 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 PRB2P02812 416 aaPredicted RBP5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SPART-AS1P0CW21 52 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 FHL2Q14192 279 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 RHOHQ15669 191 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 PET117Q6UWS5 81 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 Q8N976 141 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 ZNRF2Q8NHG8 242 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 IFI27L1Q96BM0 104 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 RETNQ9HD89 108 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 Q9UF83 564 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 CYSLTR1Q9Y271 337 aa5.42□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 H0Y8G0 127 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 K7EIL1 84 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TSHBP01222 138 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DAD1P61803 113 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 S100A12P80511 92 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 CDPF1Q6NVV7 123 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 C2orf66Q6UXQ4 117 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 DEFB104AQ8WTQ1 72 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 TOMM6Q96B49 74 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 PRADC1Q9BSG0 188 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 HHLA3Q9XRX5 114 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 MGAM2Q2M2H8 2515 aa5.41□□□□□ -1.54
SCARNA20.1-201ENST00000516009 GAGE12JA6NER3 117 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 ATP5G1P05496 136 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 UBE2D3P61077 147 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 UBE2D2P62837 147 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 GAGE1Q13065 139 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 GAGE4Q13068 117 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 GAGE5Q13069 117 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 COTL1Q14019 142 aa5.4□□□□□ -1.54
SCARNA20.1-201ENST00000516009 GAGE13Q4V321 117 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms