RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 NXT2Q9NPJ8 142 aaKnown RBP6.55□□□□□ -1.36
CPNE4-213ENST00000515418 PRSS47A8MTI9 375 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 LEPROTL1O95214 131 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 C3orf79P0CE67 100 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 OR11H2Q8NH07 326 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 SMIM2Q9BVW6 85 aa6.55□□□□□ -1.36
CPNE4-213ENST00000515418 JOSD1Q15040 202 aaPredicted RBP6.54□□□□□ -1.36
CPNE4-213ENST00000515418 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
CPNE4-213ENST00000515418 C20orf78Q9BR46 151 aa6.54□□□□□ -1.36
CPNE4-213ENST00000515418 OVOL2Q9BRP0 275 aa6.54□□□□□ -1.36
CPNE4-213ENST00000515418 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
CPNE4-213ENST00000515418 NIT2Q9NQR4 276 aa6.54□□□□□ -1.36
CPNE4-213ENST00000515418 TRGV2A0A075B6R0 118 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 SDHAF1A6NFY7 115 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 SMIM6P0DI80 62 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 POLR2KP53803 58 aaKnown RBP6.53□□□□□ -1.36
CPNE4-213ENST00000515418 RIPPLY3P57055 190 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 LGALS9BQ3B8N2 356 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 SAMD5Q5TGI4 173 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 SPATA12Q7Z6I5 190 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 TMEM70Q9BUB7 260 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 H0Y8G0 127 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 LAGE3Q14657 143 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 C18orf15Q96N68 181 aa6.53□□□□□ -1.36
CPNE4-213ENST00000515418 PPP1R17O96001 155 aa6.52□□□□□ -1.37
CPNE4-213ENST00000515418 HBDP02042 147 aa6.52□□□□□ -1.37
CPNE4-213ENST00000515418 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
CPNE4-213ENST00000515418 FCER1GP30273 86 aa6.52□□□□□ -1.37
CPNE4-213ENST00000515418 LURAP1LQ8IV03 231 aa6.52□□□□□ -1.37
CPNE4-213ENST00000515418 Q8N976 141 aa6.52□□□□□ -1.37
CPNE4-213ENST00000515418 IGHV4-28A0A0C4DH34 117 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 SMIM9A6NGZ8 99 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 VCYO14598 125 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 NUDT3O95989 172 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 RNF183Q96D59 192 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 RETNQ9HD89 108 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 RHODO00212 210 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 ZFP2Q6ZN57 461 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 NEXN-AS1Q8NBZ9 246 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 PMCHL2Q9BQD1 86 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 TNFRSF18Q9Y5U5 241 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
CPNE4-213ENST00000515418 TRBV27A0A0K0K1C4 114 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 H7C1H1 209 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 NDUFAF3Q9BU61 184 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 HSPB8Q9UJY1 196 aa6.5□□□□□ -1.37
CPNE4-213ENST00000515418 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 SYS1-DBNDD2H3BUS1 97 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 Q8NAQ8 132 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 PHLDA1Q8WV24 401 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-213ENST00000515418 MAP1LC3CQ9BXW4 147 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 ZMAT5Q9UDW3 170 aaKnown RBP6.49□□□□□ -1.37
CPNE4-213ENST00000515418 PCP4L1A6NKN8 68 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 TSHBP01222 138 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 RPL39P62891 51 aaKnown RBP6.49□□□□□ -1.37
CPNE4-213ENST00000515418 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 ZNRF2Q8NHG8 242 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 KIR2DL4Q99706 377 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 CELA1Q9UNI1 258 aa6.49□□□□□ -1.37
CPNE4-213ENST00000515418 TRGV4A0A0C4DH28 118 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 LOC100131303A0A0U1RQF7 123 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 A8MZ25 164 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 I3L3M4 83 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
CPNE4-213ENST00000515418 FHL2Q14192 279 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 MAJINQ3KP22 176 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 DEFB121Q5J5C9 76 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 C2orf66Q6UXQ4 117 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 EDA2RQ9HAV5 297 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 DKK2Q9UBU2 259 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 MIFP14174 115 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 LINC00612Q8N6U2 182 aa6.48□□□□□ -1.37
CPNE4-213ENST00000515418 GAGE12JA6NER3 117 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 K7EIL1 84 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 K7EQD1 137 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 GAGE1Q13065 139 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 GAGE4Q13068 117 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 GAGE5Q13069 117 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 GAGE13Q4V321 117 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 SBSPONQ8IVN8 264 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 MRAPQ8TCY5 172 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 PRO1933Q9H354 126 aa6.47□□□□□ -1.37
CPNE4-213ENST00000515418 TRBV7-3A0A075B6L6 115 aa6.46□□□□□ -1.37
CPNE4-213ENST00000515418 K7EMI3 77 aa6.46□□□□□ -1.37
CPNE4-213ENST00000515418 PRSS1P07477 247 aa6.46□□□□□ -1.37
CPNE4-213ENST00000515418 PET117Q6UWS5 81 aa6.46□□□□□ -1.37
CPNE4-213ENST00000515418 ZNF664Q8N3J9 261 aa6.46□□□□□ -1.37
CPNE4-213ENST00000515418 SCGB3A1Q96QR1 104 aa6.46□□□□□ -1.37
CPNE4-213ENST00000515418 TP53TG1Q9Y2A0 90 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms