RNA–Protein interactions for RNA: ENST00000514665.1

USP53-209, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,233 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-209ENST00000514665 C11orf86A6NJI1 115 aa9.7□□□□□ -0.86
USP53-209ENST00000514665 EDA2RQ9HAV5 297 aa9.7□□□□□ -0.86
USP53-209ENST00000514665 TRBV6-1A0A0K0K1D8 114 aa9.69□□□□□ -0.86
USP53-209ENST00000514665 ANGP03950 147 aaKnown RBP9.69□□□□□ -0.86
USP53-209ENST00000514665 XCL1P47992 114 aa9.69□□□□□ -0.86
USP53-209ENST00000514665 BAALCQ8WXS3 180 aa9.69□□□□□ -0.86
USP53-209ENST00000514665 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
USP53-209ENST00000514665 OPRPNQ99935 248 aaPredicted RBP9.69□□□□□ -0.86
USP53-209ENST00000514665 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
USP53-209ENST00000514665 A0A0J9YY99 117 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 IGF1P05019 195 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 RS1O15537 224 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 DAND5Q8N907 189 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 INAFM2P0DMQ5 153 aa9.68□□□□□ -0.86
USP53-209ENST00000514665 CRIP1P50238 77 aa9.67□□□□□ -0.86
USP53-209ENST00000514665 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
USP53-209ENST00000514665 DNAH14Q0VDD8 3507 aa9.67□□□□□ -0.86
USP53-209ENST00000514665 ODF3BA8MYP8 253 aa9.67□□□□□ -0.86
USP53-209ENST00000514665 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
USP53-209ENST00000514665 SOCS3O14543 225 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 C3orf56Q8N813 242 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 ZNF561-AS1K7EIQ3 104 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 CRYGBP07316 175 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 GPHB5Q86YW7 130 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 K7EMT4 169 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
USP53-209ENST00000514665 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
USP53-209ENST00000514665 IGLC6P0CF74 106 aa9.65□□□□□ -0.86
USP53-209ENST00000514665 E9PLD3 99 aa9.65□□□□□ -0.86
USP53-209ENST00000514665 C19orf84I3L1E1 186 aa9.65□□□□□ -0.86
USP53-209ENST00000514665 TOMM6Q96B49 74 aa9.65□□□□□ -0.86
USP53-209ENST00000514665 ESM1Q9NQ30 184 aa9.65□□□□□ -0.86
USP53-209ENST00000514665 DEFB113Q30KQ7 82 aa9.64□□□□□ -0.87
USP53-209ENST00000514665 Q6ZQT7 251 aa9.64□□□□□ -0.87
USP53-209ENST00000514665 C15orf53Q8NAA6 179 aa9.64□□□□□ -0.87
USP53-209ENST00000514665 ACANP16112 2415 aa9.64□□□□□ -0.87
USP53-209ENST00000514665 TRAV12-1A0A0B4J245 112 aa9.64□□□□□ -0.87
USP53-209ENST00000514665 CEMP1Q6PRD7 247 aaPredicted RBP9.64□□□□□ -0.87
USP53-209ENST00000514665 A0A0J9YX75 114 aa9.64□□□□□ -0.87
USP53-209ENST00000514665 PTPRSQ13332 1948 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 MYCNOSP40205 109 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 ATG2AQ2TAZ0 1938 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 HAMPP81172 84 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 PTH2Q96A98 100 aa9.63□□□□□ -0.87
USP53-209ENST00000514665 A6NDX4 124 aa9.62□□□□□ -0.87
USP53-209ENST00000514665 TIMM17AQ99595 171 aa9.62□□□□□ -0.87
USP53-209ENST00000514665 CHD7Q9P2D1 2997 aa9.62□□□□□ -0.87
USP53-209ENST00000514665 ANKRD29Q8N6D5 301 aa9.62□□□□□ -0.87
USP53-209ENST00000514665 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
USP53-209ENST00000514665 UBE2DNLQ8IWF7 75 aa9.62□□□□□ -0.87
USP53-209ENST00000514665 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 J3QKU1 62 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 C20orf203Q8NBC4 194 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 EPG5Q9HCE0 2579 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 P0DMU3 169 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 TRIOO75962 3097 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 USP34Q70CQ2 3546 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 CRLF1O75462 422 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 IGLV2-11P01706 119 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 SMAD5-AS1Q9Y6J3 95 aa9.61□□□□□ -0.87
USP53-209ENST00000514665 PSCAO43653 123 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 GYPEP15421 78 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 CRYBA4P53673 196 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 TEN1Q86WV5 123 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 MED14OSP0DP75 135 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 IFITM1P13164 125 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
USP53-209ENST00000514665 TRAV4A0A0B4J268 109 aa9.59□□□□□ -0.87
USP53-209ENST00000514665 APOC4P55056 127 aa9.59□□□□□ -0.87
USP53-209ENST00000514665 C20orf173Q96LM9 149 aa9.59□□□□□ -0.87
USP53-209ENST00000514665 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
USP53-209ENST00000514665 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
USP53-209ENST00000514665 LRP4O75096 1905 aa9.59□□□□□ -0.87
USP53-209ENST00000514665 LINC00310P59036 64 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 UBL5Q9BZL1 73 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 K7EQD1 137 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 C10orf99Q6UWK7 81 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 EBI3Q14213 229 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
USP53-209ENST00000514665 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
USP53-209ENST00000514665 ICOSQ9Y6W8 199 aa9.57□□□□□ -0.88
USP53-209ENST00000514665 ZFAND2AQ8N6M9 145 aa9.57□□□□□ -0.88
USP53-209ENST00000514665 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
USP53-209ENST00000514665 TNFRSF13BO14836 293 aaPredicted RBP9.57□□□□□ -0.88
USP53-209ENST00000514665 DEFB4AO15263 64 aa9.57□□□□□ -0.88
USP53-209ENST00000514665 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
USP53-209ENST00000514665 B5MCH6 92 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms