RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 UBE2D1P51668 147 aa9.41□□□□□ -0.9
SDHA-216ENST00000514027 FAM19A4Q96LR4 140 aa9.41□□□□□ -0.9
SDHA-216ENST00000514027 SMIM9A6NGZ8 99 aa9.41□□□□□ -0.9
SDHA-216ENST00000514027 SUMO2P61956 95 aaKnown RBP9.41□□□□□ -0.9
SDHA-216ENST00000514027 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
SDHA-216ENST00000514027 RNASE3P12724 160 aaKnown RBP9.4□□□□□ -0.9
SDHA-216ENST00000514027 PSMB8P28062 276 aa9.4□□□□□ -0.9
SDHA-216ENST00000514027 C3orf56Q8N813 242 aa9.4□□□□□ -0.9
SDHA-216ENST00000514027 LINC01356Q8N9X3 169 aa9.4□□□□□ -0.91
SDHA-216ENST00000514027 TRAV12-3A0A0B4J271 114 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 PRB1P04280 392 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 SCGB1C2P0DMR2 95 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 SLC25A16P16260 332 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 DSCR9P59020 149 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 ORMDL2Q53FV1 153 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 SCGB3A1Q96QR1 104 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 ANKRD17O75179 2603 aaKnown RBP9.39□□□□□ -0.91
SDHA-216ENST00000514027 DCANP1Q8TF63 244 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
SDHA-216ENST00000514027 K7EMT4 169 aa9.38□□□□□ -0.91
SDHA-216ENST00000514027 CD7P09564 240 aa9.38□□□□□ -0.91
SDHA-216ENST00000514027 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
SDHA-216ENST00000514027 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
SDHA-216ENST00000514027 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
SDHA-216ENST00000514027 ZANQ9Y493 2812 aa9.38□□□□□ -0.91
SDHA-216ENST00000514027 SLC25A20O43772 301 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 LGALS1P09382 135 aaKnown RBP9.37□□□□□ -0.91
SDHA-216ENST00000514027 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 KLLNB2CW77 178 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 PLNP26678 52 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 JPT2Q9H910 190 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 POLQO75417 2590 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 MUC4Q99102 2169 aa9.37□□□□□ -0.91
SDHA-216ENST00000514027 A0A087WWL8 130 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 SYNJ2BPP57105 145 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 TOMM6Q96B49 74 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 DUX5Q96PT3 197 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 FBN2P35556 2912 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 CENPEQ02224 2701 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
SDHA-216ENST00000514027 F5H697 171 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 H7C1H1 209 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
SDHA-216ENST00000514027 FAM74A4Q5TZK3 123 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 NDUFA11Q86Y39 141 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 USP9YO00507 2555 aaPredicted RBP9.35□□□□□ -0.91
SDHA-216ENST00000514027 F8VRH5 84 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 COX6B1P14854 86 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 DOPEY2Q9Y3R5 2298 aa9.35□□□□□ -0.91
SDHA-216ENST00000514027 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
SDHA-216ENST00000514027 DUSP14O95147 198 aaKnown RBP9.34□□□□□ -0.91
SDHA-216ENST00000514027 FAM208BQ5VWN6 2430 aa9.34□□□□□ -0.91
SDHA-216ENST00000514027 IGHV4OR15-8A0A075B7B6 117 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 A0A087WW49 117 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 J3KT08 172 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 NXPH4O95158 308 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 PPP1R17O96001 155 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 SUMO4Q6EEV6 95 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 Q8N1Y9 231 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 ZNF580Q9UK33 172 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 ZFYVE26Q68DK2 2539 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 A0A096LNT2 108 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 C9JAW5 83 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 J3QLI3 93 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 SPINK13Q1W4C9 94 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
SDHA-216ENST00000514027 LRRC75A-AS1Q8N1F1 130 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
SDHA-216ENST00000514027 BBC3Q96PG8 261 aaPredicted RBP9.33□□□□□ -0.92
SDHA-216ENST00000514027 BEX4Q9NWD9 120 aaPredicted RBP9.33□□□□□ -0.92
SDHA-216ENST00000514027 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
SDHA-216ENST00000514027 A0A0J9YX75 114 aa9.32□□□□□ -0.92
SDHA-216ENST00000514027 NEXN-AS1Q8NBZ9 246 aa9.32□□□□□ -0.92
SDHA-216ENST00000514027 NTN5Q8WTR8 489 aaPredicted RBP9.32□□□□□ -0.92
SDHA-216ENST00000514027 KIF25-AS1Q9Y6Z4 181 aa9.32□□□□□ -0.92
SDHA-216ENST00000514027 HOXD3P31249 432 aaPredicted RBP9.32□□□□□ -0.92
SDHA-216ENST00000514027 SRSF9Q13242 221 aaKnown RBP eCLIP9.32□□□□□ -0.92
SDHA-216ENST00000514027 ZNF462Q96JM2 2506 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 K7EQG2 157 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 M0R2P5 195 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 NDUFA7O95182 113 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 LINC00315P59091 139 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 ZNF56Q15929 161 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
SDHA-216ENST00000514027 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 A0A1B0GX51 115 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 TMEM89A2RUT3 159 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 RPL13AP40429 203 aaKnown RBP9.31□□□□□ -0.92
SDHA-216ENST00000514027 TIRAPP58753 221 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 C10orf126Q8N4M7 172 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 PLEKHB2Q96CS7 222 aa9.31□□□□□ -0.92
SDHA-216ENST00000514027 ZNF702PQ9H963 129 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms