RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 CMTM2Q8TAZ6 248 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 HIST1H2BAQ96A08 127 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 MANBALQ9NQG1 85 aa5.97□□□□□ -1.45
NEDD9-213ENST00000512665 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 GAGE12JA6NER3 117 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 GAGE1Q13065 139 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 GAGE4Q13068 117 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 GAGE5Q13069 117 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 LINC01559Q495D7 138 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 ZNF876PQ49A33 203 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 GAGE13Q4V321 117 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 STPG4Q8N801 248 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 PTH2Q96A98 100 aa5.96□□□□□ -1.46
NEDD9-213ENST00000512665 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 hDV102S1A0JD36 115 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 F6UZH7 168 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 K7EQM0 130 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 PAGE4O60829 102 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 SLPIP03973 132 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 ZFP2Q6ZN57 461 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 GOLT1AQ6ZVE7 132 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 C11orf52Q96A22 123 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 TVP23CQ96ET8 276 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 AP5S1Q9NUS5 200 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 PRR34Q9NV39 138 aa5.95□□□□□ -1.46
NEDD9-213ENST00000512665 IGHV3-73A0A0B4J1V6 119 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 MUC21A0A0G2JKD1 596 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 PEX7O00628 323 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 GNRH2O43555 120 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 IFNA7P01567 189 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 S100A9P06702 114 aaKnown RBP5.94□□□□□ -1.46
NEDD9-213ENST00000512665 UBE2G2P60604 165 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 PSG8Q9UQ74 426 aa5.94□□□□□ -1.46
NEDD9-213ENST00000512665 IGLV10-54A0A075B6I4 117 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 IFNA1P01562 189 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 TYMSP04818 313 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 BCL2P10415 239 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 GNG5P63218 68 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 FLI1Q01543 452 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-213ENST00000512665 MEF2BQ02080 365 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-213ENST00000512665 COX6A2Q02221 97 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 SAPCD1Q5SSQ6 148 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 CST9LP1Q5W188 147 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 C15orf54Q8N8G6 183 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 FMC1Q96HJ9 113 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 SDF2L1Q9HCN8 221 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 GNG13Q9P2W3 67 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 LINC00474Q9P2X8 69 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 ZFP30Q9Y2G7 519 aa5.93□□□□□ -1.46
NEDD9-213ENST00000512665 PDE6DO43924 150 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 PKIAP61925 76 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 PIK3CD-AS1Q5SR53 167 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 KCNS1Q96KK3 526 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 MLST8Q9BVC4 326 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 TREM1Q9NP99 234 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 Q9UF83 564 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 NAGKQ9UJ70 344 aa5.92□□□□□ -1.46
NEDD9-213ENST00000512665 A0A1B0GV50 99 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 TMEM250H0YL14 139 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 LTAP01374 205 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 ANGP03950 147 aaKnown RBP5.91□□□□□ -1.46
NEDD9-213ENST00000512665 IFITM2Q01629 132 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 MPV17L2Q567V2 206 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 ZNF506Q5JVG8 444 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 SMIM12Q96EX1 92 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 FAM210AQ96ND0 272 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 NDFIP1Q9BT67 221 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 SAMD10Q9BYL1 202 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 PARLQ9H300 379 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 SMDT1Q9H4I9 107 aa5.91□□□□□ -1.46
NEDD9-213ENST00000512665 TRAV34A0A0B4J273 112 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 TRAV21A0A0B4J279 112 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 RPL13AP40429 203 aaKnown RBP5.9□□□□□ -1.46
NEDD9-213ENST00000512665 SMUG1Q53HV7 270 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 PRNTQ86SH4 94 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 Q86TA4 180 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 FER1L6-AS1Q8NA97 138 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 C9orf85Q96MD7 179 aa5.9□□□□□ -1.46
NEDD9-213ENST00000512665 FABP5P3A8MUU1 101 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 A8MWV9 139 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 GZMBP10144 247 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 AKR1C3P42330 323 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 RPL35P42766 123 aaKnown RBP5.89□□□□□ -1.47
NEDD9-213ENST00000512665 CRIP1P50238 77 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 ZNF80P51504 273 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-213ENST00000512665 CLLU1Q5K131 121 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 UFSP1Q6NVU6 142 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 PRSS3P2Q8NHM4 247 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 DIRC1Q969H9 104 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 SGK494Q96LW2 274 aa5.89□□□□□ -1.47
NEDD9-213ENST00000512665 TRBV6-8A0A0A6YYG3 113 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 TMEM262E9PQX1 116 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 GCGP01275 180 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 UBE2G1P62253 170 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 TPRXLQ17RH7 258 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 ZNF674Q2M3X9 581 aa5.88□□□□□ -1.47
NEDD9-213ENST00000512665 DNLZQ5SXM8 178 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms