RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 STAG3L3P0CL85 134 aa7.85□□□□□ -1.15
DDX41-215ENST00000512431 H2BFSP57053 126 aa7.85□□□□□ -1.15
DDX41-215ENST00000512431 CFAP161Q6P656 301 aa7.85□□□□□ -1.15
DDX41-215ENST00000512431 TMEM167BQ9NRX6 74 aa7.85□□□□□ -1.15
DDX41-215ENST00000512431 PET100P0DJ07 73 aa7.84□□□□□ -1.15
DDX41-215ENST00000512431 RPL12P30050 165 aaKnown RBP7.84□□□□□ -1.15
DDX41-215ENST00000512431 RAB5CP51148 216 aa7.84□□□□□ -1.15
DDX41-215ENST00000512431 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
DDX41-215ENST00000512431 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
DDX41-215ENST00000512431 TMSB15BA0A087X1C1 80 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 TRBV6-1A0A0K0K1D8 114 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 F5H697 171 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 SH2D1AO60880 128 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 CXorf1O96002 111 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
DDX41-215ENST00000512431 FAM162BQ5T6X4 162 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 RAB24Q969Q5 203 aa7.83□□□□□ -1.16
DDX41-215ENST00000512431 IGHV1-24A0A0C4DH33 117 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 H7C1H1 209 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 SSNA1O43805 119 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 CRIP1P50238 77 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.16
DDX41-215ENST00000512431 PRR27Q6MZM9 219 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 Q6ZRP5 223 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 PRSS3P2Q8NHM4 247 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 VAX2Q9UIW0 290 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 LPAP08519 4548 aa7.82□□□□□ -1.16
DDX41-215ENST00000512431 MUC21A0A0G2JKD1 596 aa7.81□□□□□ -1.16
DDX41-215ENST00000512431 A0A1W2PRE2 83 aa7.81□□□□□ -1.16
DDX41-215ENST00000512431 IQCJQ1A5X6 159 aa7.81□□□□□ -1.16
DDX41-215ENST00000512431 Q86TA4 180 aa7.81□□□□□ -1.16
DDX41-215ENST00000512431 LINC00474Q9P2X8 69 aa7.81□□□□□ -1.16
DDX41-215ENST00000512431 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
DDX41-215ENST00000512431 PEX7O00628 323 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 MPC2O95563 127 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 MBP02144 154 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 LINC01559Q495D7 138 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 Q6ZNX1 250 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 C20orf203Q8NBC4 194 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 ZNF471Q9BX82 626 aaPredicted RBP7.8□□□□□ -1.16
DDX41-215ENST00000512431 WFDC1Q9HC57 220 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 PKIGQ9Y2B9 76 aa7.8□□□□□ -1.16
DDX41-215ENST00000512431 SMIM17P0DL12 118 aa7.79□□□□□ -1.16
DDX41-215ENST00000512431 SULT1A2P50226 295 aa7.79□□□□□ -1.16
DDX41-215ENST00000512431 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
DDX41-215ENST00000512431 AQP10Q96PS8 301 aa7.79□□□□□ -1.16
DDX41-215ENST00000512431 ACTR3CQ9C0K3 210 aaPredicted RBP7.79□□□□□ -1.16
DDX41-215ENST00000512431 A0A1B0GUV1 79 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 A0A1B0GVG6 124 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 G3V3Q6 166 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 UBE2G1P62253 170 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 ZNF674Q2M3X9 581 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 HIGD2BQ4VC39 106 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 Q5BKY6 102 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 COX8CQ7Z4L0 72 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 ZNF664Q8N3J9 261 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 NKX6-2Q9C056 277 aaPredicted RBP7.78□□□□□ -1.16
DDX41-215ENST00000512431 MED28Q9H204 178 aa7.78□□□□□ -1.16
DDX41-215ENST00000512431 IGLV4-60A0A075B6I1 120 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 A0A096LNI7 61 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 GAGE12HA6NDE8 117 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 SPANXN1Q5VSR9 72 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 C15orf56Q8N910 161 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 FMC1Q96HJ9 113 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 TMEM243Q9BU79 118 aa7.77□□□□□ -1.17
DDX41-215ENST00000512431 UBE2L6O14933 153 aa7.76□□□□□ -1.17
DDX41-215ENST00000512431 UBE2G2P60604 165 aa7.76□□□□□ -1.17
DDX41-215ENST00000512431 SERF2P84101 59 aa7.76□□□□□ -1.17
DDX41-215ENST00000512431 OR10AG1Q8NH19 301 aa7.76□□□□□ -1.17
DDX41-215ENST00000512431 PSMG3Q9BT73 122 aaPredicted RBP7.76□□□□□ -1.17
DDX41-215ENST00000512431 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
DDX41-215ENST00000512431 ATP6V0CP27449 155 aa7.75□□□□□ -1.17
DDX41-215ENST00000512431 SSTP61278 116 aa7.75□□□□□ -1.17
DDX41-215ENST00000512431 CACNG7P62955 275 aa7.75□□□□□ -1.17
DDX41-215ENST00000512431 hCG_2014768A0A024R1R8 64 aa7.74□□□□□ -1.17
DDX41-215ENST00000512431 SMLR1H3BR10 107 aa7.74□□□□□ -1.17
DDX41-215ENST00000512431 GIPP09681 153 aaPredicted RBP7.74□□□□□ -1.17
DDX41-215ENST00000512431 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
DDX41-215ENST00000512431 TNFSF18Q9UNG2 199 aa7.74□□□□□ -1.17
DDX41-215ENST00000512431 MUC2Q02817 5179 aa7.73□□□□□ -1.17
DDX41-215ENST00000512431 IGKV3OR2-268A0A0C4DH90 116 aa7.73□□□□□ -1.17
DDX41-215ENST00000512431 MUC21A0A140T8X8 626 aa7.73□□□□□ -1.17
DDX41-215ENST00000512431 CXCL1P09341 107 aa7.73□□□□□ -1.17
DDX41-215ENST00000512431 AP1S3Q96PC3 154 aa7.73□□□□□ -1.17
DDX41-215ENST00000512431 GVQW2A0A096LPI5 108 aaPredicted RBP7.72□□□□□ -1.17
DDX41-215ENST00000512431 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
DDX41-215ENST00000512431 LTAP01374 205 aa7.72□□□□□ -1.17
DDX41-215ENST00000512431 PRR4Q16378 134 aa7.72□□□□□ -1.17
DDX41-215ENST00000512431 SNAI2O43623 268 aa7.71□□□□□ -1.18
DDX41-215ENST00000512431 MGPP08493 103 aa7.71□□□□□ -1.18
DDX41-215ENST00000512431 OR5AL1P0C617 328 aa7.71□□□□□ -1.18
DDX41-215ENST00000512431 SSBP4Q9BWG4 385 aaPredicted RBP7.71□□□□□ -1.18
DDX41-215ENST00000512431 M0QY20 66 aa7.7□□□□□ -1.18
DDX41-215ENST00000512431 MT-ND6P03923 174 aa7.7□□□□□ -1.18
DDX41-215ENST00000512431 AMTP48728 403 aa7.7□□□□□ -1.18
DDX41-215ENST00000512431 NKX2-5P52952 324 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms