RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 PPP1R17O96001 155 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 IQCJQ1A5X6 159 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 NIT2Q9NQR4 276 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 Q9UF83 564 aa7.04□□□□□ -1.28
PDGFRA-209ENST00000512143 TRBV10-1A0A0K0K1A3 114 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 TRBV6-4A0A1B0GX49 114 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 LINC01546A6NGU7 62 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 C5orf52A6NGY3 159 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 H7C1H1 209 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 NHLRC4P0CG21 123 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 P0DMU3 169 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 FAM231AP0DMU4 169 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 FAM231CP0DMU5 169 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 ESDP10768 282 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 HOXA5P20719 270 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 NDUFA6P56556 154 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 DAD1P61803 113 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 SLC25A29Q8N8R3 303 aa7.03□□□□□ -1.28
PDGFRA-209ENST00000512143 NUPR1O60356 82 aa7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 SUMO2P61956 95 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 NIT1Q86X76 327 aa7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 NEXN-AS1Q8NBZ9 246 aa7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 DNAJC30Q96LL9 226 aa7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 TMEM70Q9BUB7 260 aa7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.29
PDGFRA-209ENST00000512143 TRGV4A0A0C4DH28 118 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 TRBV27A0A0K0K1C4 114 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 K7EQD1 137 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 SERF1AO75920 110 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 ATP5G1P05496 136 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 LINC00614P0C842 121 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 IFI27P40305 119 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 CRYBA4P53673 196 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 Q8N8P6 123 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 ST20Q9HBF5 79 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 HHLA3Q9XRX5 114 aa7.01□□□□□ -1.29
PDGFRA-209ENST00000512143 LOC389332A0A1B0GUA5 103 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 SDHAF1A6NFY7 115 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 VCYO14598 125 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 LINC00694P0DN24 101 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 SNRPEP62304 92 aaKnown RBP7□□□□□ -1.29
PDGFRA-209ENST00000512143 RHOHQ15669 191 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 CHCHD1Q96BP2 118 aaKnown RBP7□□□□□ -1.29
PDGFRA-209ENST00000512143 VSIG2Q96IQ7 327 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
PDGFRA-209ENST00000512143 PRO0255Q9UI72 69 aa7□□□□□ -1.29
PDGFRA-209ENST00000512143 S100A6P06703 90 aa6.99□□□□□ -1.29
PDGFRA-209ENST00000512143 Q6ZTC4 211 aa6.99□□□□□ -1.29
PDGFRA-209ENST00000512143 HIST3H2BBQ8N257 126 aa6.99□□□□□ -1.29
PDGFRA-209ENST00000512143 PRSS3P2Q8NHM4 247 aa6.99□□□□□ -1.29
PDGFRA-209ENST00000512143 C11orf45Q8TAV5 145 aa6.99□□□□□ -1.29
PDGFRA-209ENST00000512143 TNFRSF18Q9Y5U5 241 aa6.99□□□□□ -1.29
PDGFRA-209ENST00000512143 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 TRBV7-3A0A075B6L6 115 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 LOC100131303A0A0U1RQF7 123 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 K7EMI3 77 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 PMCHP20382 165 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 NANOS2P60321 138 aaKnown RBP6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 UBE2D3P61077 147 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 UBE2D2P62837 147 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 ZNRF2Q8NHG8 242 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 PRADC1Q9BSG0 188 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 AP5S1Q9NUS5 200 aa6.98□□□□□ -1.29
PDGFRA-209ENST00000512143 A0A096LNJ9 63 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 F5H768 121 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 H3BNG1 76 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 I3L3M4 83 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 TSHBP01222 138 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 RPL36AP83881 106 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 RNASEKQ6P5S7 137 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 FA2HQ7L5A8 372 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 NEGR1Q7Z3B1 354 aa6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 RPL36ALQ969Q0 106 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 PACRGQ96M98 296 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-209ENST00000512143 TRAV26-1A0A087WT03 109 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 IGHV1-24A0A0C4DH33 117 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 GAGE12JA6NER3 117 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 TCAPO15273 167 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 PAX4O43316 350 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 GAGE1Q13065 139 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 GAGE4Q13068 117 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 GAGE5Q13069 117 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 LAGE3Q14657 143 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 GAGE13Q4V321 117 aa6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 DAZ4Q86SG3 579 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 DAZ3Q9NR90 486 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-209ENST00000512143 DEFB131BA0A096LNP1 70 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 A0A0J9YY99 117 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 HSBP1O75506 76 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 GYPEP15421 78 aa6.95□□□□□ -1.3
PDGFRA-209ENST00000512143 HTN3P15516 51 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms