RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GAS8-AS1O95177 125 aa7.46□□□□□ -1.21
RNF4-216ENST00000511859 FAM162BQ5T6X4 162 aa7.46□□□□□ -1.21
RNF4-216ENST00000511859 LINC00862A6NCI5 91 aa7.46□□□□□ -1.22
RNF4-216ENST00000511859 RPL19P84098 196 aaKnown RBP7.46□□□□□ -1.22
RNF4-216ENST00000511859 A0A087WWC5 75 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 B4DEV8 164 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 NDUFS6O75380 124 aaKnown RBP7.45□□□□□ -1.22
RNF4-216ENST00000511859 TYMSP04818 313 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 COX8CQ7Z4L0 72 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 KRTAP9-2Q9BYQ4 174 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 SMDT1Q9H4I9 107 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 SDF2L1Q9HCN8 221 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 URGCP-MRPS24S4R325 110 aa7.45□□□□□ -1.22
RNF4-216ENST00000511859 IGKV3D-20A0A0C4DH25 116 aa7.44□□□□□ -1.22
RNF4-216ENST00000511859 ADIRFQ15847 76 aa7.44□□□□□ -1.22
RNF4-216ENST00000511859 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
RNF4-216ENST00000511859 CFAP126Q5VTH2 177 aa7.44□□□□□ -1.22
RNF4-216ENST00000511859 KCNS1Q96KK3 526 aa7.44□□□□□ -1.22
RNF4-216ENST00000511859 RNASE7Q9H1E1 156 aaKnown RBP7.44□□□□□ -1.22
RNF4-216ENST00000511859 KRBOX1C9JBD0 128 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 GZMBP10144 247 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 ZNF876PQ49A33 203 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 FAM74A3Q4VXF1 159 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 DGAT2L7PQ6IED9 249 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 ATRAIDQ6UW56 229 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 LINC01551Q86U37 167 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 LINC01600Q96MT4 127 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 NAT8Q9UHE5 227 aa7.43□□□□□ -1.22
RNF4-216ENST00000511859 C19orf71A6NCJ1 209 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 P01737 135 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
RNF4-216ENST00000511859 ELOBQ15370 118 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 UQCC3Q6UW78 93 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 NUDT10Q8NFP7 164 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 OR2D3Q8NGH3 330 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 NUDT11Q96G61 164 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 KLK12Q9UKR0 248 aa7.42□□□□□ -1.22
RNF4-216ENST00000511859 IGHV3-73A0A0B4J1V6 119 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 TMEM218A2RU14 115 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 F8W036 122 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 H3BVH4 76 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 ADCYAP1P18509 176 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 S100A4P26447 101 aaKnown RBP7.41□□□□□ -1.22
RNF4-216ENST00000511859 SSTP61278 116 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 Q0VG73 95 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 LINC01559Q495D7 138 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 NIT1Q86X76 327 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 DNAJC30Q96LL9 226 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 BIN3Q9NQY0 253 aa7.41□□□□□ -1.22
RNF4-216ENST00000511859 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.22
RNF4-216ENST00000511859 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.22
RNF4-216ENST00000511859 GATCO43716 136 aaKnown RBP7.4□□□□□ -1.22
RNF4-216ENST00000511859 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.22
RNF4-216ENST00000511859 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
RNF4-216ENST00000511859 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
RNF4-216ENST00000511859 TPPP3Q9BW30 176 aa7.4□□□□□ -1.22
RNF4-216ENST00000511859 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
RNF4-216ENST00000511859 ARMS2P0C7Q2 107 aa7.39□□□□□ -1.23
RNF4-216ENST00000511859 PTH2Q96A98 100 aa7.39□□□□□ -1.23
RNF4-216ENST00000511859 RPP21Q9H633 154 aaKnown RBP7.39□□□□□ -1.23
RNF4-216ENST00000511859 GAGE12JA6NER3 117 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 LINC00694P0DN24 101 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 GAGE1Q13065 139 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 GAGE4Q13068 117 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 GAGE5Q13069 117 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 KCNIP4Q6PIL6 250 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 SDIM1Q6ZPB5 146 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 C9orf85Q96MD7 179 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
RNF4-216ENST00000511859 A0A087WX48 190 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 FAM231DQ6ZW35 169 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 OR10G8Q8NGN5 311 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 OSTCQ9NRP0 149 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 IL36BQ9NZH7 164 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 LPAP08519 4548 aa7.37□□□□□ -1.23
RNF4-216ENST00000511859 USP17L23D6RBM5 183 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 PANO1I0J062 215 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 M0R381 172 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 PRSS1P07477 247 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 RPS20P60866 119 aaKnown RBP7.36□□□□□ -1.23
RNF4-216ENST00000511859 CIRBPQ14011 172 aaKnown RBP7.36□□□□□ -1.23
RNF4-216ENST00000511859 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 FER1L6-AS1Q8NA97 138 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 DPH3Q96FX2 82 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 JPT2Q9H910 190 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 PHLDA3Q9Y5J5 127 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 V9GYV3 84 aa7.36□□□□□ -1.23
RNF4-216ENST00000511859 A0A0J9YXV3 536 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms