RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ADGRG4Q8IZF6 3080 aa5.48□□□□□ -1.53
CPNE4-208ENST00000511604 IGHV1-18A0A0C4DH31 117 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 IGKV3-15P01624 115 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 Q6JHZ5 121 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 TMEM61Q8N0U2 210 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 LITAFQ99732 161 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 DMXL1Q9Y485 3027 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 IGHV3-64A0A075B6Q5 118 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 FAM19A1Q7Z5A9 133 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 TMEM105Q8N8V8 129 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 CNEP1R1Q8N9A8 125 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 SLC25A15Q9Y619 301 aa5.47□□□□□ -1.53
CPNE4-208ENST00000511604 TRGV5A0A0B4J1U4 118 aa5.46□□□□□ -1.53
CPNE4-208ENST00000511604 TEX22C9J3V5 150 aa5.46□□□□□ -1.53
CPNE4-208ENST00000511604 I3L2K1 104 aa5.46□□□□□ -1.53
CPNE4-208ENST00000511604 M0R1W7 72 aa5.46□□□□□ -1.53
CPNE4-208ENST00000511604 IGHV3-23P01764 117 aa5.46□□□□□ -1.53
CPNE4-208ENST00000511604 LOXP28300 417 aaPredicted RBP5.46□□□□□ -1.53
CPNE4-208ENST00000511604 RPL27AP46776 148 aaKnown RBP5.46□□□□□ -1.53
CPNE4-208ENST00000511604 CIRBPQ14011 172 aaKnown RBP5.46□□□□□ -1.53
CPNE4-208ENST00000511604 TMEM141Q96I45 108 aa5.46□□□□□ -1.53
CPNE4-208ENST00000511604 IGHV3-35A0A0C4DH35 117 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 KNCNA6PVL3 124 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 NTN3O00634 580 aaPredicted RBP5.46□□□□□ -1.54
CPNE4-208ENST00000511604 IGHG2P01859 326 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 C22orf24Q9Y442 160 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 RAI1Q7Z5J4 1906 aaPredicted RBP5.46□□□□□ -1.54
CPNE4-208ENST00000511604 CACNA1EQ15878 2313 aa5.46□□□□□ -1.54
CPNE4-208ENST00000511604 BAALC-AS2P0C853 105 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 CD59P13987 128 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 RPL39P62891 51 aaKnown RBP5.45□□□□□ -1.54
CPNE4-208ENST00000511604 RNF182Q8N6D2 247 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 NUP37Q8NFH4 326 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 RNASE6Q93091 150 aaKnown RBP5.45□□□□□ -1.54
CPNE4-208ENST00000511604 LINC00574Q9H8X3 128 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 SMAD5-AS1Q9Y6J3 95 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 TMEM30BQ3MIR4 351 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 ADAMTSL4-AS1Q5T5F5 129 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 FAM222AQ5U5X8 452 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 ZNF580Q9UK33 172 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 UBE2D4Q9Y2X8 147 aa5.45□□□□□ -1.54
CPNE4-208ENST00000511604 RBMY1BA6NDE4 496 aaKnown RBP5.44□□□□□ -1.54
CPNE4-208ENST00000511604 RBMY1EA6NEQ0 496 aaKnown RBP5.44□□□□□ -1.54
CPNE4-208ENST00000511604 ADARB2-AS1A8MUL3 147 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 H7BZZ5 65 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 K7EIM0 57 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 COX7A2LO14548 114 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 RBMY1DP0C7P1 496 aaKnown RBP5.44□□□□□ -1.54
CPNE4-208ENST00000511604 RBMY1A1P0DJD3 496 aaKnown RBP5.44□□□□□ -1.54
CPNE4-208ENST00000511604 RBMY1CP0DJD4 496 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 XCL1P47992 114 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 RBMY1FQ15415 496 aaKnown RBP5.44□□□□□ -1.54
CPNE4-208ENST00000511604 MIAQ16674 131 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 C22orf34Q6ZV56 151 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 XCL2Q9UBD3 114 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 MALRD1Q5VYJ5 2156 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 SPTBN4Q9H254 2564 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 M0R381 172 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 DNAL4O96015 105 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 GHRHP01286 108 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 ATP1A1-AS1Q5TC04 95 aa5.44□□□□□ -1.54
CPNE4-208ENST00000511604 PATE3B3GLJ2 98 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 MRPS36P82909 103 aaKnown RBP5.43□□□□□ -1.54
CPNE4-208ENST00000511604 LYPD5Q6UWN5 251 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 LYPD2Q6UXB3 125 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 ZFHX2Q9C0A1 2572 aaPredicted RBP5.43□□□□□ -1.54
CPNE4-208ENST00000511604 CACNA1HO95180 2353 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 PPP1R17O96001 155 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 IGF1P05019 195 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 LINC00846Q9NV44 126 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 LINC00474Q9P2X8 69 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
CPNE4-208ENST00000511604 IGHV3OR16-13A0A075B7E8 117 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 IGHV3-74A0A0B4J1X5 117 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 IGHV3-66A0A0C4DH42 116 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 CCL21O00585 134 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 MGPP08493 103 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 IGHV3-30-3P0DP02 117 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 SS18Q15532 418 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 GPHB5Q86YW7 130 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 RETNQ9HD89 108 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 RNF7Q9UBF6 113 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 ARHGAP32A7KAX9 2087 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 CEP250Q9BV73 2442 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 NXPH4O95158 308 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 C9orf106Q8NAJ2 232 aa5.42□□□□□ -1.54
CPNE4-208ENST00000511604 OPRPNQ99935 248 aaPredicted RBP5.42□□□□□ -1.54
CPNE4-208ENST00000511604 COPS9Q8WXC6 57 aa5.41□□□□□ -1.54
CPNE4-208ENST00000511604 F8W735 103 aaPredicted RBP5.41□□□□□ -1.54
CPNE4-208ENST00000511604 M0R1B8 84 aa5.41□□□□□ -1.54
CPNE4-208ENST00000511604 IGLV1-44P01699 117 aa5.41□□□□□ -1.54
CPNE4-208ENST00000511604 IGHV1-46P01743 117 aa5.41□□□□□ -1.54
CPNE4-208ENST00000511604 PTPRZ1P23471 2315 aaPredicted RBP5.41□□□□□ -1.54
CPNE4-208ENST00000511604 MAP1BP46821 2468 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms