RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 SDHAF1A6NFY7 115 aa10.9□□□□□ -0.66
SCLT1-209ENST00000511426 BTF3P20290 206 aaKnown RBP10.9□□□□□ -0.66
SCLT1-209ENST00000511426 Q6ZTI0 123 aa10.9□□□□□ -0.66
SCLT1-209ENST00000511426 A0A096LNJ9 63 aa10.89□□□□□ -0.67
SCLT1-209ENST00000511426 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
SCLT1-209ENST00000511426 MAP1LC3CQ9BXW4 147 aa10.89□□□□□ -0.67
SCLT1-209ENST00000511426 C3orf79P0CE67 100 aa10.89□□□□□ -0.67
SCLT1-209ENST00000511426 KRTDAPP60985 99 aa10.89□□□□□ -0.67
SCLT1-209ENST00000511426 TRGV2A0A075B6R0 118 aa10.88□□□□□ -0.67
SCLT1-209ENST00000511426 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
SCLT1-209ENST00000511426 G3V4G9 280 aa10.88□□□□□ -0.67
SCLT1-209ENST00000511426 PMCHL1Q16048 86 aa10.88□□□□□ -0.67
SCLT1-209ENST00000511426 SPATA12Q7Z6I5 190 aa10.88□□□□□ -0.67
SCLT1-209ENST00000511426 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
SCLT1-209ENST00000511426 VWFP04275 2813 aa10.87□□□□□ -0.67
SCLT1-209ENST00000511426 C20orf202A1L168 122 aa10.87□□□□□ -0.67
SCLT1-209ENST00000511426 ATP5LO75964 103 aa10.87□□□□□ -0.67
SCLT1-209ENST00000511426 RHOHQ15669 191 aa10.87□□□□□ -0.67
SCLT1-209ENST00000511426 KPRPQ5T749 579 aaPredicted RBP10.87□□□□□ -0.67
SCLT1-209ENST00000511426 PET117Q6UWS5 81 aa10.87□□□□□ -0.67
SCLT1-209ENST00000511426 TNFRSF18Q9Y5U5 241 aa10.87□□□□□ -0.67
SCLT1-209ENST00000511426 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
SCLT1-209ENST00000511426 I3L3M4 83 aa10.86□□□□□ -0.67
SCLT1-209ENST00000511426 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
SCLT1-209ENST00000511426 GAGE12BA1L429 117 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 SYS1-DBNDD2H3BUS1 97 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 K7EQD1 137 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 GAGE7O76087 117 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 SCGB1D1O95968 90 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 NUDT3O95989 172 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 GAGE12FP0CL80 117 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 GAGE12GP0CL81 117 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 GAGE12IP0CL82 117 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 S100A12P80511 92 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 ZNF479Q96JC4 524 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 MDFIQ99750 246 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 IGHV3-73A0A0B4J1V6 119 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 RIPPLY3P57055 190 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 Q8NAQ8 132 aa10.85□□□□□ -0.67
SCLT1-209ENST00000511426 NEXN-AS1Q8NBZ9 246 aa10.84□□□□□ -0.67
SCLT1-209ENST00000511426 TOMM6Q96B49 74 aa10.84□□□□□ -0.67
SCLT1-209ENST00000511426 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
SCLT1-209ENST00000511426 IGHV4-28A0A0C4DH34 117 aa10.83□□□□□ -0.68
SCLT1-209ENST00000511426 RPL36AP83881 106 aaKnown RBP10.83□□□□□ -0.68
SCLT1-209ENST00000511426 RPL36ALQ969Q0 106 aaKnown RBP10.83□□□□□ -0.68
SCLT1-209ENST00000511426 CYSLTR1Q9Y271 337 aa10.83□□□□□ -0.68
SCLT1-209ENST00000511426 TRBV7-3A0A075B6L6 115 aa10.82□□□□□ -0.68
SCLT1-209ENST00000511426 DKK2Q9UBU2 259 aa10.82□□□□□ -0.68
SCLT1-209ENST00000511426 TEX43Q6ZNM6 134 aa10.82□□□□□ -0.68
SCLT1-209ENST00000511426 Q6ZSN1 163 aa10.82□□□□□ -0.68
SCLT1-209ENST00000511426 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
SCLT1-209ENST00000511426 Q8N976 141 aa10.82□□□□□ -0.68
SCLT1-209ENST00000511426 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
SCLT1-209ENST00000511426 TRGV4A0A0C4DH28 118 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 SPART-AS1P0CW21 52 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 EMP1P54849 157 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 FAM222AQ5U5X8 452 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 LINC01545Q5VT33 79 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 LGALS9CQ6DKI2 356 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
SCLT1-209ENST00000511426 TSHBP01222 138 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 NPSP0C0P6 89 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 ERASQ7Z444 233 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 TRRAPQ9Y4A5 3859 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 NACAE9PAV3 2078 aa10.8□□□□□ -0.68
SCLT1-209ENST00000511426 STAB1Q9NY15 2570 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.79□□□□□ -0.68
SCLT1-209ENST00000511426 FHL2Q14192 279 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
SCLT1-209ENST00000511426 P0DMU3 169 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 FAM231AP0DMU4 169 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 FAM231CP0DMU5 169 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 COTL1Q14019 142 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 ZMAT4Q9H898 229 aa10.79□□□□□ -0.68
SCLT1-209ENST00000511426 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
SCLT1-209ENST00000511426 KRTAP21-3Q3LHN1 58 aa10.78□□□□□ -0.68
SCLT1-209ENST00000511426 LURAP1LQ8IV03 231 aa10.78□□□□□ -0.68
SCLT1-209ENST00000511426 SCGB3A1Q96QR1 104 aa10.78□□□□□ -0.68
SCLT1-209ENST00000511426 TRAV12-1A0A0B4J245 112 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 UBE2D3P61077 147 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 DAD1P61803 113 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 UBE2D2P62837 147 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 TMEM97Q5BJF2 176 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 Q6ZN92 141 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 C20orf203Q8NBC4 194 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 PRO0255Q9UI72 69 aa10.77□□□□□ -0.69
SCLT1-209ENST00000511426 VAMP8Q9BV40 100 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 HHLA3Q9XRX5 114 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 ATP5G1P05496 136 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 PRSS1P07477 247 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms