RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 IGHV4-4A0A075B6R2 117 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 H0Y8G0 127 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 NUDT3O95989 172 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 PMCHP20382 165 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 DNLZQ5SXM8 178 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 IL17DQ8TAD2 202 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 B9D2Q9BPU9 175 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 RS1O15537 224 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 MED14OSP0DP75 135 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 FHL2Q14192 279 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 C18orf32Q8TCD1 76 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 LINC00467Q9BRT7 94 aa5.69□□□□□ -1.5
SMAD1-209ENST00000511125 M0QY20 66 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 SERF1AO75920 110 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 MT-ND6P03923 174 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 GYPEP15421 78 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 ZFAND6Q6FIF0 208 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 TNFRSF18Q9Y5U5 241 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 TRAV4A0A0B4J268 109 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 A0A1B0GW15 77 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 PHOX2AO14813 284 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 NXPH4O95158 308 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 NIT1Q86X76 327 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 PAX4O43316 350 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 ATP5G1P05496 136 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 LGALS9BQ3B8N2 356 aa5.68□□□□□ -1.5
SMAD1-209ENST00000511125 DEFB131BA0A096LNP1 70 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 IGLL5B9A064 214 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 RASL11AQ6T310 242 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 NRACQ8N912 160 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 LYRM9A8MSI8 78 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 BTF3P20290 206 aaKnown RBP5.67□□□□□ -1.5
SMAD1-209ENST00000511125 NEXN-AS1Q8NBZ9 246 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 C18orf15Q96N68 181 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 ST20Q9HBF5 79 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 TP53TG1Q9Y2A0 90 aa5.67□□□□□ -1.5
SMAD1-209ENST00000511125 FA2HQ7L5A8 372 aa5.66□□□□□ -1.5
SMAD1-209ENST00000511125 K7EQD1 137 aa5.66□□□□□ -1.5
SMAD1-209ENST00000511125 SUMO2P61956 95 aaKnown RBP5.66□□□□□ -1.5
SMAD1-209ENST00000511125 UFSP1Q6NVU6 142 aa5.66□□□□□ -1.5
SMAD1-209ENST00000511125 MAP1LC3AQ9H492 121 aa5.66□□□□□ -1.5
SMAD1-209ENST00000511125 CEMP1Q6PRD7 247 aaPredicted RBP5.66□□□□□ -1.5
SMAD1-209ENST00000511125 URB1-AS1Q96HZ7 61 aa5.66□□□□□ -1.5
SMAD1-209ENST00000511125 NIT2Q9NQR4 276 aa5.66□□□□□ -1.5
SMAD1-209ENST00000511125 COX19Q49B96 90 aa5.65□□□□□ -1.5
SMAD1-209ENST00000511125 RNASE13Q5GAN3 156 aaKnown RBP5.65□□□□□ -1.5
SMAD1-209ENST00000511125 VSIG2Q96IQ7 327 aa5.65□□□□□ -1.5
SMAD1-209ENST00000511125 U3KQK5 164 aa5.65□□□□□ -1.5
SMAD1-209ENST00000511125 LYSTQ99698 3801 aa5.65□□□□□ -1.5
SMAD1-209ENST00000511125 HSBP1O75506 76 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 FCER1GP30273 86 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 AKR1D1P51857 326 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 LINC00310P59036 64 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 RPL39P62891 51 aaKnown RBP5.65□□□□□ -1.51
SMAD1-209ENST00000511125 LINC00173Q6ZV60 143 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 TMEM70Q9BUB7 260 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.51
SMAD1-209ENST00000511125 IGKV3OR2-268A0A0C4DH90 116 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.51
SMAD1-209ENST00000511125 RHODO00212 210 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 LINC00614P0C842 121 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 CRYBA4P53673 196 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 ZC2HC1BQ5TFG8 222 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 MRAP2Q96G30 205 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 PRO0255Q9UI72 69 aa5.65□□□□□ -1.51
SMAD1-209ENST00000511125 AMTP48728 403 aa5.64□□□□□ -1.51
SMAD1-209ENST00000511125 RPL36AP83881 106 aaKnown RBP5.64□□□□□ -1.51
SMAD1-209ENST00000511125 RPL36ALQ969Q0 106 aaKnown RBP5.64□□□□□ -1.51
SMAD1-209ENST00000511125 OPRPNQ99935 248 aaPredicted RBP5.64□□□□□ -1.51
SMAD1-209ENST00000511125 PRADC1Q9BSG0 188 aa5.64□□□□□ -1.51
SMAD1-209ENST00000511125 Q8N3U1 123 aa5.64□□□□□ -1.51
SMAD1-209ENST00000511125 TRBV7-3A0A075B6L6 115 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 H7C1H1 209 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 S100A2P29034 98 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 AP5S1Q9NUS5 200 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 TMEM262E9PQX1 116 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 PPBPP02775 128 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 TCTAP57738 103 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 PMCHL2Q9BQD1 86 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 RHOHQ15669 191 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 ZFP2Q6ZN57 461 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 NDUFAF3Q9BU61 184 aa5.63□□□□□ -1.51
SMAD1-209ENST00000511125 GAGE6Q13070 117 aa5.62□□□□□ -1.51
SMAD1-209ENST00000511125 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
SMAD1-209ENST00000511125 KIR2DL4Q99706 377 aa5.62□□□□□ -1.51
SMAD1-209ENST00000511125 CLPSL2Q6UWE3 100 aa5.62□□□□□ -1.51
SMAD1-209ENST00000511125 C11orf68Q9H3H3 251 aaKnown RBP5.62□□□□□ -1.51
SMAD1-209ENST00000511125 VCYO14598 125 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 ATP6V0E2Q8NHE4 81 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 CHCHD5Q9BSY4 110 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 IGHV1-24A0A0C4DH33 117 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 TRBV6-4A0A1B0GX49 114 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 I3L3M4 83 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 POLR2KP53803 58 aaKnown RBP5.61□□□□□ -1.51
SMAD1-209ENST00000511125 COTL1Q14019 142 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
SMAD1-209ENST00000511125 EDA2RQ9HAV5 297 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms