RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
SNF8-207ENST00000509995 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 IGSF23A1L1A6 192 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 CTDSP2O14595 271 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 STX12Q86Y82 276 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 ZFP82Q8N141 532 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 THAP6Q8TBB0 222 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 CHCHD10Q8WYQ3 142 aaPredicted RBP6.25□□□□□ -1.41
SNF8-207ENST00000509995 LSM5Q9Y4Y9 91 aaKnown RBP6.25□□□□□ -1.41
SNF8-207ENST00000509995 USH2AO75445 5202 aa6.25□□□□□ -1.41
SNF8-207ENST00000509995 A0A087X002 238 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 BCL2P10415 239 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 FGF6P10767 208 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 TPT1P13693 172 aaKnown RBP6.24□□□□□ -1.41
SNF8-207ENST00000509995 TAS2R45P59539 299 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 FLI1Q01543 452 aaPredicted RBP6.24□□□□□ -1.41
SNF8-207ENST00000509995 SYCNQ0VAF6 134 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 ATP6V1FQ16864 119 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 PRNTQ86SH4 94 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 TMEM243Q9BU79 118 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 KCNIP2Q9NS61 270 aa6.24□□□□□ -1.41
SNF8-207ENST00000509995 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
SNF8-207ENST00000509995 TCRAP04437 139 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 FOXI1Q12951 378 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 TMEM252Q8N6L7 170 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 MRPS26Q9BYN8 205 aaKnown RBP6.23□□□□□ -1.41
SNF8-207ENST00000509995 PPDPFQ9H3Y8 114 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 Q9H521 79 aa6.23□□□□□ -1.41
SNF8-207ENST00000509995 GRIFINA4D1Z8 144 aa6.22□□□□□ -1.41
SNF8-207ENST00000509995 FABP5P3A8MUU1 101 aa6.22□□□□□ -1.41
SNF8-207ENST00000509995 KRBOX1C9JBD0 128 aa6.22□□□□□ -1.41
SNF8-207ENST00000509995 K7EQM0 130 aa6.22□□□□□ -1.41
SNF8-207ENST00000509995 SAPCD1Q5SSQ6 148 aa6.22□□□□□ -1.41
SNF8-207ENST00000509995 SDHCQ99643 169 aaPredicted RBP6.22□□□□□ -1.41
SNF8-207ENST00000509995 NAA50Q9GZZ1 169 aaKnown RBP6.22□□□□□ -1.41
SNF8-207ENST00000509995 VCX3AQ9NNX9 186 aa6.22□□□□□ -1.41
SNF8-207ENST00000509995 RSL24D1Q9UHA3 163 aaKnown RBP6.22□□□□□ -1.41
SNF8-207ENST00000509995 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
SNF8-207ENST00000509995 M0R036 132 aa6.21□□□□□ -1.42
SNF8-207ENST00000509995 TMBIM6P55061 237 aa6.21□□□□□ -1.42
SNF8-207ENST00000509995 AP3S2P59780 193 aa6.21□□□□□ -1.42
SNF8-207ENST00000509995 C5orf17Q8NAS9 161 aa6.21□□□□□ -1.42
SNF8-207ENST00000509995 ZNF561-AS1K7EIQ3 104 aa6.2□□□□□ -1.42
SNF8-207ENST00000509995 UBE2L6O14933 153 aa6.2□□□□□ -1.42
SNF8-207ENST00000509995 APOMO95445 188 aa6.2□□□□□ -1.42
SNF8-207ENST00000509995 PVALBP20472 110 aaPredicted RBP6.2□□□□□ -1.42
SNF8-207ENST00000509995 CAMPP49913 170 aa6.2□□□□□ -1.42
SNF8-207ENST00000509995 SEC61BP60468 96 aaKnown RBP6.2□□□□□ -1.42
SNF8-207ENST00000509995 RPL18AQ02543 176 aaKnown RBP6.2□□□□□ -1.42
SNF8-207ENST00000509995 EIF5AL1Q6IS14 154 aaKnown RBP6.2□□□□□ -1.42
SNF8-207ENST00000509995 TOMM5Q8N4H5 51 aa6.2□□□□□ -1.42
SNF8-207ENST00000509995 F5H697 171 aa6.19□□□□□ -1.42
SNF8-207ENST00000509995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.19□□□□□ -1.42
SNF8-207ENST00000509995 LCE2BO14633 110 aa6.19□□□□□ -1.42
SNF8-207ENST00000509995 MEF2BQ02080 365 aaPredicted RBP6.19□□□□□ -1.42
SNF8-207ENST00000509995 PQLC2Q6ZP29 291 aa6.19□□□□□ -1.42
SNF8-207ENST00000509995 ISOC2Q96AB3 205 aa6.19□□□□□ -1.42
SNF8-207ENST00000509995 MED28Q9H204 178 aa6.19□□□□□ -1.42
SNF8-207ENST00000509995 NUP35Q8NFH5 326 aa6.18□□□□□ -1.42
SNF8-207ENST00000509995 WDR61Q9GZS3 305 aaKnown RBP6.18□□□□□ -1.42
SNF8-207ENST00000509995 ARL2-SNX15V9GYD0 113 aa6.18□□□□□ -1.42
SNF8-207ENST00000509995 C17orf112F2Z3M2 114 aa6.17□□□□□ -1.42
SNF8-207ENST00000509995 XCL1P47992 114 aa6.17□□□□□ -1.42
SNF8-207ENST00000509995 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
SNF8-207ENST00000509995 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
SNF8-207ENST00000509995 DEDD2Q8WXF8 326 aa6.17□□□□□ -1.42
SNF8-207ENST00000509995 FLVCR2Q9UPI3 526 aa6.17□□□□□ -1.42
SNF8-207ENST00000509995 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
SNF8-207ENST00000509995 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
SNF8-207ENST00000509995 IGLV4-69A0A075B6H9 119 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 TMSB15BA0A087X1C1 80 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 ZNF861PO60384 105 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 TSHBP01222 138 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 CRIP1P50238 77 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 NHLH2Q02577 135 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 OR10AG1Q8NH19 301 aa6.16□□□□□ -1.42
SNF8-207ENST00000509995 A0A087WXM4 84 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 FAM25EA8MYX2 175 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 SH2D1AO60880 128 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.42
SNF8-207ENST00000509995 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 LINC01559Q495D7 138 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 PGLYRP4Q96LB8 373 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 EPDR1Q9UM22 224 aa6.15□□□□□ -1.42
SNF8-207ENST00000509995 TRAV34A0A0B4J273 112 aa6.14□□□□□ -1.43
SNF8-207ENST00000509995 NDUFB6O95139 128 aa6.14□□□□□ -1.43
SNF8-207ENST00000509995 UBE2BP63146 152 aa6.14□□□□□ -1.43
SNF8-207ENST00000509995 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
SNF8-207ENST00000509995 H3BMQ9 156 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 M0QY20 66 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 HMGB3O15347 200 aaKnown RBP6.13□□□□□ -1.43
SNF8-207ENST00000509995 CCL25O15444 150 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 RAB32Q13637 225 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 RNF151Q2KHN1 245 aa6.13□□□□□ -1.43
SNF8-207ENST00000509995 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms