RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CARHSP1Q9Y2V2 147 aaKnown RBP3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 KLK5Q9Y337 293 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P44-201ENST00000508597 NACAE9PAV3 2078 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 CSMD3Q7Z407 3707 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 TMSB15BA0A087X1C1 80 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 DEFB131BA0A096LNP1 70 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 A0A1B0GW15 77 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 H3BNG1 76 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 RS1O15537 224 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 NXPH4O95158 308 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRGC1P0CF51 173 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 DEFB130BP0DP73 79 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 DEFB130AP0DP74 79 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 CTRLP40313 264 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 RPL19P84098 196 aaKnown RBP3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 GAGE5Q13069 117 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 GAGE6Q13070 117 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 SPANXN1Q5VSR9 72 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 ZFP2Q6ZN57 461 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 Q6ZTI0 123 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 OR4C5Q8NGB2 326 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 PHLDA1Q8WV24 401 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 BORCS7Q96B45 105 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 IMMP2LQ96T52 175 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 TMEM242Q9NWH2 141 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 NAT8BQ9UHF3 227 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 V9GYV3 84 aa3.86□□□□□ -1.79
HMGB1P44-201ENST00000508597 A0A087WWC5 75 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 SNAPINO95295 136 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 S100A8P05109 93 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 ADCYAP1P18509 176 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 RPL24P83731 157 aaKnown RBP3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 RIGQ13278 110 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 RHEBQ15382 184 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 RNF212Q495C1 297 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 CEMP1Q6PRD7 247 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 LYZL1Q6UWQ5 148 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 Q6ZTC4 211 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 SMIM15Q7Z3B0 74 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 SVBPQ8N300 66 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 C15orf53Q8NAA6 179 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 FRZBQ92765 325 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 BTF3L4Q96K17 158 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 AP1S3Q96PC3 154 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 MRPL16Q9NX20 251 aaKnown RBP3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRAV9-1A0A075B6T8 112 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRGV4A0A0C4DH28 118 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 A0A1B0GUT8 65 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 TRBV6-4A0A1B0GX49 114 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 IFITM10A6NMD0 228 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 HIGD1CA8MV81 97 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 F5H768 121 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 M0R381 172 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 SMIM17P0DL12 118 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 CFAP126Q5VTH2 177 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 KCNIP4Q6PIL6 250 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 ATP5L2Q7Z4Y8 100 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 OR10AG1Q8NH19 301 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 GTSF1Q8WW33 167 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 TPPP3Q9BW30 176 aa3.84□□□□□ -1.79
HMGB1P44-201ENST00000508597 STARD9Q9P2P6 4700 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 TENM2Q9NT68 2774 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 TRBV10-1A0A0K0K1A3 114 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 A0A1B0GUV1 79 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 C7orf77A4D0Y5 90 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 APOC3P02656 99 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 CRYGDP07320 174 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 GZMBP10144 247 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 NTF3P20783 257 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 S100PP25815 95 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 RAB4BP61018 213 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 RHOHQ15669 191 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 COX19Q49B96 90 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 UFSP1Q6NVU6 142 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 RASL11AQ6T310 242 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 SLC7A5P1Q8MH63 180 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 POM121L12Q8N7R1 296 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 NUP35Q8NFH5 326 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 PGLYRP4Q96LB8 373 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 DPH3P1Q9H4G8 78 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 HHLA3Q9XRX5 114 aa3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 DYNC2H1Q8NCM8 4307 aaKnown RBP3.83□□□□□ -1.8
HMGB1P44-201ENST00000508597 TRAV26-1A0A087WT03 109 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 IGLL5B9A064 214 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 H7C1H1 209 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 PPP1R17O96001 155 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 IGHV3-53P01767 116 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 HTN3P15516 51 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 GATA1P15976 413 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 CRYBA4P53673 196 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 MRPL23Q16540 153 aaKnown RBP3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 CASC10Q5T4H9 136 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 DNAJC30Q96LL9 226 aa3.82□□□□□ -1.8
HMGB1P44-201ENST00000508597 TMEM191AQ9H0A3 160 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms