RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 IGHV3-43A0A0B4J1X8 118 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 TMEM256-PLSCR3K7ERE1 68 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 IGLV3-19P01714 112 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 IGHV3-43DP0DP04 118 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 RPS21P63220 83 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 KLK15Q9H2R5 256 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 IGHV7-4-1A0A0J9YVY3 117 aa7.86□□□□□ -1.15
PDLIM5-210ENST00000508216 WT1-ASQ06250 92 aa7.86□□□□□ -1.15
PDLIM5-210ENST00000508216 ECSCRQ19T08 205 aa7.86□□□□□ -1.15
PDLIM5-210ENST00000508216 LCA10Q71F78 164 aa7.86□□□□□ -1.15
PDLIM5-210ENST00000508216 IGHV4OR15-8A0A075B7B6 117 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 A0A087WW49 117 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 SAA1P0DJI8 122 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 SPINK2P20155 84 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 DEFB110Q30KQ9 67 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 OPRPNQ99935 248 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 DEFB126Q9BYW3 111 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 PCNX2A6NKB5 2137 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 PIEZO1Q92508 2521 aa7.85□□□□□ -1.15
PDLIM5-210ENST00000508216 IGHV1-18A0A0C4DH31 117 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 hDV103S1A0JD37 113 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 DEFB108AA8MXU0 73 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 PATE4P0C8F1 98 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 SAA2P0DJI9 122 aaPredicted RBP7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 ATP11AUNQ6ZP68 121 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 Q6ZTC4 211 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 LINC01560Q8TB33 94 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 CGB3P0DN86 165 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 CGB7P0DN87 165 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 MED14OSP0DP75 135 aa7.84□□□□□ -1.15
PDLIM5-210ENST00000508216 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
PDLIM5-210ENST00000508216 FOLR3P41439 243 aa7.83□□□□□ -1.16
PDLIM5-210ENST00000508216 DIRC1Q969H9 104 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 RP1P56715 2156 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 DSCAML1Q8TD84 2053 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 EPOPA6NHQ4 379 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 CCL5P13501 91 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 Q6ZRP5 223 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 LINC00574Q9H8X3 128 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 CCL26Q9Y258 94 aa7.82□□□□□ -1.16
PDLIM5-210ENST00000508216 FREM1Q5H8C1 2179 aa7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 TRAV12-3A0A0B4J271 114 aa7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 A6NN06 94 aa7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 JMJD7-PLA2G4BH0Y9G9 81 aa7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 CTSGP08311 255 aa7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 POLR2KP53803 58 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
PDLIM5-210ENST00000508216 IGKV3D-20A0A0C4DH25 116 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 LYZP61626 148 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 UBL5Q9BZL1 73 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 TNCP24821 2201 aa7.8□□□□□ -1.16
PDLIM5-210ENST00000508216 H0YGX0 51 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 CCL4P13236 92 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 C15orf32Q32M92 178 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 HIST2H2BCQ6DN03 193 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 HIST2H2BDQ6DRA6 164 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 Q6ZSV7 163 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 Q8N6K4 173 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 FAM218AQ96MZ4 157 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 TRBV6-5A0A0K0K1A5 114 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 VCYO14598 125 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 CXCL6P80162 114 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 SYCNQ0VAF6 134 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 GPHB5Q86YW7 130 aa7.79□□□□□ -1.16
PDLIM5-210ENST00000508216 F6UB75 175 aa7.78□□□□□ -1.16
PDLIM5-210ENST00000508216 UBE2AP49459 152 aa7.78□□□□□ -1.16
PDLIM5-210ENST00000508216 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
PDLIM5-210ENST00000508216 ZNF625Q96I27 306 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-210ENST00000508216 A8MUN3 132 aa7.77□□□□□ -1.17
PDLIM5-210ENST00000508216 PRYO14603 147 aa7.77□□□□□ -1.17
PDLIM5-210ENST00000508216 SMAD5-AS1Q9Y6J3 95 aa7.77□□□□□ -1.17
PDLIM5-210ENST00000508216 IGHV3-15A0A0B4J1V0 119 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 NDUFA1O15239 70 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 IGKV1-16P04430 117 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 Q8N3U1 123 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 LINC00308Q8TCZ7 52 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 IGKV3D-15A0A087WSY6 115 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 IGKV2-40A0A087WW87 121 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 A0A087WZ39 114 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 IGKV2D-40P01614 121 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 LPAL2Q16609 132 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 PIK3CD-AS1Q5SR53 167 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 IGFL3Q6UXB1 125 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 CCL4L1Q8NHW4 92 aa7.76□□□□□ -1.17
PDLIM5-210ENST00000508216 LOC100131303A0A0U1RQF7 123 aa7.75□□□□□ -1.17
PDLIM5-210ENST00000508216 RPL39LQ96EH5 51 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-210ENST00000508216 CDH23Q9H251 3354 aa7.75□□□□□ -1.17
PDLIM5-210ENST00000508216 IGKV1-17P01599 117 aa7.74□□□□□ -1.17
PDLIM5-210ENST00000508216 C17orf58Q2M2W7 97 aa7.74□□□□□ -1.17
PDLIM5-210ENST00000508216 Q6ZS52 159 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms