RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 FAM231BA6NCW3 169 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 SMIM17P0DL12 118 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 RIGQ13278 110 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 ZFP2Q6ZN57 461 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 AMN1Q8IY45 258 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 SVBPQ8N300 66 aa6.13□□□□□ -1.43
SCAMP1-202ENST00000506858 KMT2AQ03164 3969 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 K7EQD1 137 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 TRGC1P0CF51 173 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 RHEBQ15382 184 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 GATD1Q8NB37 220 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 RNF185Q96GF1 192 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 CTDSP1Q9GZU7 261 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 DPH3P1Q9H4G8 78 aa6.12□□□□□ -1.43
SCAMP1-202ENST00000506858 IGHV3-38A0A0C4DH36 116 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 TRBV6-4A0A1B0GX49 114 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 RHODO00212 210 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 SCO1O75880 301 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 SNAPINO95295 136 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 NCR2O95944 276 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 ESRGQ1W209 222 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 CBLN2Q8IUK8 224 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 ZNRF2Q8NHG8 242 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 HYDINQ4G0P3 5121 aa6.11□□□□□ -1.43
SCAMP1-202ENST00000506858 A0A087WWC5 75 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 TGIF2-C20orf24A0A0A6YYL0 155 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 M0QY20 66 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 RAB4AP20338 218 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 RAB4BP61018 213 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 SLAQ13239 276 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 RHOHQ15669 191 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 NEXN-AS1Q8NBZ9 246 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 PRADC1Q9BSG0 188 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 TMEM191AQ9H0A3 160 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 ICOSQ9Y6W8 199 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 LY6G6CO95867 125 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 RPS10P46783 165 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 HBBP68871 147 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 MRPL23Q16540 153 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 MRPL51Q4U2R6 128 aaKnown RBP6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 BTF3L4Q96K17 158 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 FAM210BQ96KR6 192 aa6.1□□□□□ -1.43
SCAMP1-202ENST00000506858 SRIP30626 198 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 KIAA1644Q3SXP7 199 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 FAM104BQ5XKR9 115 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 KCNIP4Q6PIL6 250 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 LYPD5Q6UWN5 251 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 C15orf53Q8NAA6 179 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 IMMP2LQ96T52 175 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 TMEM242Q9NWH2 141 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 LINC00588Q9Y4M8 146 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 DNAH2Q9P225 4427 aa6.09□□□□□ -1.43
SCAMP1-202ENST00000506858 RYR2Q92736 4967 aa6.09□□□□□ -1.44
SCAMP1-202ENST00000506858 RYR3Q15413 4870 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 CIDEAO60543 219 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 ATP6V1G1O75348 118 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 S100PP25815 95 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 ELOBQ15370 118 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 RASL11AQ6T310 242 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 TMEM136Q6ZRR5 245 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 ATP6V0E2Q8NHE4 81 aa6.08□□□□□ -1.44
SCAMP1-202ENST00000506858 IGLV2-18A0A075B6J9 118 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 H3BNG1 76 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 LINC00694P0DN24 101 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 UBE2D3P61077 147 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 UBE2D2P62837 147 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 UBE2DNLQ8IWF7 75 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 LINC00476Q8WZB0 136 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 DNAH6Q9C0G6 4158 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 TRBV7-3A0A075B6L6 115 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 D6R8Y8 96 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 RPL36AP83881 106 aaKnown RBP6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 RPL36ALQ969Q0 106 aaKnown RBP6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 YPEL4Q96NS1 127 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 NIT2Q9NQR4 276 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
SCAMP1-202ENST00000506858 DNAH10Q8IVF4 4471 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 TRBV10-1A0A0K0K1A3 114 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 A0A1B0GW15 77 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 M0R2N4 97 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 CKS2P33552 79 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 CCL18P55774 89 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 OR10J3Q5JRS4 329 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 NRACQ8N912 160 aa6.06□□□□□ -1.44
SCAMP1-202ENST00000506858 H7C1H1 209 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 NPYP01303 97 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 S100A8P05109 93 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 TCTAP57738 103 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 NTM-AS1Q6ZSK4 140 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 WFDC10BQ8IUB3 73 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 GTSF1LQ9H1H1 148 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 SMCO4Q9NRQ5 59 aa6.05□□□□□ -1.44
SCAMP1-202ENST00000506858 LCE6AA0A183 80 aa6.04□□□□□ -1.44
SCAMP1-202ENST00000506858 LOC389332A0A1B0GUA5 103 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms