RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 HERVK_113P61574 105 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 MYMXA0A1B0GTQ4 84 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 CD28P10747 220 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 ORMDL2Q53FV1 153 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 Q6ZSV7 163 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 RS1O15537 224 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 SYT8Q8NBV8 401 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 BAALCQ8WXS3 180 aa7.23□□□□□ -1.25
PHF3-208ENST00000506783 LINC01559Q495D7 138 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 TRPT1Q86TN4 253 aaKnown RBP7.22□□□□□ -1.25
PHF3-208ENST00000506783 ZFAND2AQ8N6M9 145 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 C9JAW5 83 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 MRPL52Q86TS9 123 aaKnown RBP7.22□□□□□ -1.25
PHF3-208ENST00000506783 C3orf56Q8N813 242 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 NRACQ8N912 160 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 TNFRSF18Q9Y5U5 241 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 RPL35AP18077 110 aaKnown RBP7.22□□□□□ -1.25
PHF3-208ENST00000506783 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 C11orf71Q6IPW1 123 aa7.22□□□□□ -1.25
PHF3-208ENST00000506783 A0A096LPF7 62 aa7.21□□□□□ -1.25
PHF3-208ENST00000506783 RNASE1P07998 156 aaKnown RBP7.21□□□□□ -1.26
PHF3-208ENST00000506783 SPINK8P0C7L1 97 aa7.21□□□□□ -1.26
PHF3-208ENST00000506783 MRAP2Q96G30 205 aa7.21□□□□□ -1.26
PHF3-208ENST00000506783 C16orf54Q6UWD8 224 aa7.21□□□□□ -1.26
PHF3-208ENST00000506783 SIGMAR1Q99720 223 aa7.21□□□□□ -1.26
PHF3-208ENST00000506783 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 OVOL1O14753 267 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 LGALS1P09382 135 aaKnown RBP7.2□□□□□ -1.26
PHF3-208ENST00000506783 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
PHF3-208ENST00000506783 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 IGHV4OR15-8A0A075B7B6 117 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 A0A087WW49 117 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 PLNP26678 52 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 ESM1Q9NQ30 184 aa7.2□□□□□ -1.26
PHF3-208ENST00000506783 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 RNASE3P12724 160 aaKnown RBP7.19□□□□□ -1.26
PHF3-208ENST00000506783 Q8N6K4 173 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 DEFB113Q30KQ7 82 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 C10orf105Q8TEF2 133 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 SPAG8Q99932 426 aaPredicted RBP7.19□□□□□ -1.26
PHF3-208ENST00000506783 SMPXQ9UHP9 88 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 GAGE12HA6NDE8 117 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 NDUFS8O00217 210 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 HOXD3P31249 432 aaPredicted RBP7.19□□□□□ -1.26
PHF3-208ENST00000506783 COL6A5A8TX70 2615 aa7.19□□□□□ -1.26
PHF3-208ENST00000506783 NDUFA7O95182 113 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 LINC01356Q8N9X3 169 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 OR5A1Q8NGJ0 315 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 A4D1N5 150 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 OOSP1A8MZH6 123 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 VCYO14598 125 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 PLA2G2AP14555 144 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 MEIG1Q5JSS6 88 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 FOXI2Q6ZQN5 318 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 GPHB5Q86YW7 130 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 PIFOQ8TCI5 191 aa7.18□□□□□ -1.26
PHF3-208ENST00000506783 TRBV20-1A0A075B6N2 111 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 NDUFA4O00483 81 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 A6NJY4 79 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 J3QQQ9 107 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 C9orf47Q6ZRZ4 202 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 ZNF575Q86XF7 245 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 WFDC10AQ9H1F0 79 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 U3KQK5 164 aa7.17□□□□□ -1.26
PHF3-208ENST00000506783 G3V4G9 280 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 PMVKQ15126 192 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 RRN3P1Q2M238 152 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 NSUN5P1Q3KNT7 163 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 TSPEAR-AS2P59090 65 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 TMEM190Q8WZ59 177 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 SMR3AQ99954 134 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 CRIP2P52943 208 aaPredicted RBP7.16□□□□□ -1.26
PHF3-208ENST00000506783 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 ZNRF2Q8NHG8 242 aa7.16□□□□□ -1.26
PHF3-208ENST00000506783 IGHV1OR15-1A0A075B7D0 117 aa7.15□□□□□ -1.26
PHF3-208ENST00000506783 GAGE12JA6NER3 117 aa7.15□□□□□ -1.26
PHF3-208ENST00000506783 FAM223BA6NKX1 122 aa7.15□□□□□ -1.26
PHF3-208ENST00000506783 GAGE4Q13068 117 aa7.15□□□□□ -1.26
PHF3-208ENST00000506783 GAGE5Q13069 117 aa7.15□□□□□ -1.26
PHF3-208ENST00000506783 FAM223AQ8IWN6 122 aa7.15□□□□□ -1.26
PHF3-208ENST00000506783 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.27
PHF3-208ENST00000506783 DEFB130BP0DP73 79 aa7.15□□□□□ -1.27
PHF3-208ENST00000506783 DEFB130AP0DP74 79 aa7.15□□□□□ -1.27
PHF3-208ENST00000506783 DSCR9P59020 149 aa7.15□□□□□ -1.27
PHF3-208ENST00000506783 TMEM61Q8N0U2 210 aa7.15□□□□□ -1.27
PHF3-208ENST00000506783 DLX4Q92988 240 aaPredicted RBP7.15□□□□□ -1.27
PHF3-208ENST00000506783 ERG28Q9UKR5 140 aa7.14□□□□□ -1.27
PHF3-208ENST00000506783 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
PHF3-208ENST00000506783 DEFB4AO15263 64 aa7.14□□□□□ -1.27
PHF3-208ENST00000506783 HTN3P15516 51 aa7.14□□□□□ -1.27
PHF3-208ENST00000506783 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
PHF3-208ENST00000506783 TCL1BO95988 128 aa7.13□□□□□ -1.27
PHF3-208ENST00000506783 NEXN-AS1Q8NBZ9 246 aa7.13□□□□□ -1.27
PHF3-208ENST00000506783 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
PHF3-208ENST00000506783 IGLV2-18A0A075B6J9 118 aa7.13□□□□□ -1.27
PHF3-208ENST00000506783 TSPAN13O95857 204 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms