RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
SCLT1-208ENST00000506368 RNASE3P12724 160 aaKnown RBP11.95□□□□□ -0.5
SCLT1-208ENST00000506368 GRNP28799 593 aaKnown RBP11.95□□□□□ -0.5
SCLT1-208ENST00000506368 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
SCLT1-208ENST00000506368 MEIG1Q5JSS6 88 aa11.94□□□□□ -0.5
SCLT1-208ENST00000506368 SPTAN1Q13813 2472 aaKnown RBP11.93□□□□□ -0.5
SCLT1-208ENST00000506368 TEX49A0A1B0GTD5 131 aa11.93□□□□□ -0.5
SCLT1-208ENST00000506368 DOPEY1Q5JWR5 2465 aa11.93□□□□□ -0.5
SCLT1-208ENST00000506368 EIF4EBP3O60516 100 aaPredicted RBP11.93□□□□□ -0.5
SCLT1-208ENST00000506368 Q6ZQT7 251 aa11.93□□□□□ -0.5
SCLT1-208ENST00000506368 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
SCLT1-208ENST00000506368 EMP1P54849 157 aa11.92□□□□□ -0.5
SCLT1-208ENST00000506368 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
SCLT1-208ENST00000506368 LYNX1G3V0Z9 82 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 IGHV4-39P01824 125 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 LYNX1P0DP58 116 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 SUMO4Q6EEV6 95 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 DOPEY2Q9Y3R5 2298 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 TRIAP1O43715 76 aa11.91□□□□□ -0.5
SCLT1-208ENST00000506368 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 SOCS3O14543 225 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 ATP6V0E1O15342 81 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 ATP5G1P05496 136 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 C20orf173Q96LM9 149 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
SCLT1-208ENST00000506368 A0A0J9YXY3 114 aa11.9□□□□□ -0.51
SCLT1-208ENST00000506368 C19orf84I3L1E1 186 aa11.9□□□□□ -0.51
SCLT1-208ENST00000506368 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.51
SCLT1-208ENST00000506368 RNASE4P34096 147 aaKnown RBP11.9□□□□□ -0.51
SCLT1-208ENST00000506368 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.51
SCLT1-208ENST00000506368 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.89□□□□□ -0.51
SCLT1-208ENST00000506368 H7C2G1 150 aa11.89□□□□□ -0.51
SCLT1-208ENST00000506368 H7C423 109 aa11.89□□□□□ -0.51
SCLT1-208ENST00000506368 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
SCLT1-208ENST00000506368 IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
SCLT1-208ENST00000506368 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
SCLT1-208ENST00000506368 USP9YO00507 2555 aaPredicted RBP11.88□□□□□ -0.51
SCLT1-208ENST00000506368 LST1O00453 97 aa11.88□□□□□ -0.51
SCLT1-208ENST00000506368 NDUFA4O00483 81 aa11.87□□□□□ -0.51
SCLT1-208ENST00000506368 GNRH2O43555 120 aa11.87□□□□□ -0.51
SCLT1-208ENST00000506368 IGF1P05019 195 aa11.87□□□□□ -0.51
SCLT1-208ENST00000506368 LRBAP50851 2863 aa11.87□□□□□ -0.51
SCLT1-208ENST00000506368 NBPF19A0A087WUL8 3843 aa11.87□□□□□ -0.51
SCLT1-208ENST00000506368 KLLNB2CW77 178 aa11.86□□□□□ -0.51
SCLT1-208ENST00000506368 ELANEP08246 267 aa11.86□□□□□ -0.51
SCLT1-208ENST00000506368 ZNF56Q15929 161 aa11.86□□□□□ -0.51
SCLT1-208ENST00000506368 C20orf203Q8NBC4 194 aa11.86□□□□□ -0.51
SCLT1-208ENST00000506368 CELSR2Q9HCU4 2923 aa11.86□□□□□ -0.51
SCLT1-208ENST00000506368 IGHV3-49A0A0A0MS15 119 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 F5H697 171 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 J3KRW8 73 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
SCLT1-208ENST00000506368 TIMM17BO60830 172 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 LITAFQ99732 161 aa11.85□□□□□ -0.51
SCLT1-208ENST00000506368 LINC01587Q99440 93 aa11.84□□□□□ -0.51
SCLT1-208ENST00000506368 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
SCLT1-208ENST00000506368 PKDREJQ9NTG1 2253 aa11.84□□□□□ -0.51
SCLT1-208ENST00000506368 MIAQ16674 131 aa11.83□□□□□ -0.51
SCLT1-208ENST00000506368 BEX4Q9NWD9 120 aaPredicted RBP11.83□□□□□ -0.51
SCLT1-208ENST00000506368 CENPEQ02224 2701 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 I3L3M4 83 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 BRI3O95415 125 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 IGHV3-30-3P0DP02 117 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 UBE2E1P51965 193 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 FBXL19-AS1Q494R0 122 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 HIST2H2BCQ6DN03 193 aa11.83□□□□□ -0.52
SCLT1-208ENST00000506368 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
SCLT1-208ENST00000506368 TRGV11A0A075B6L2 103 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 MRPS36P82909 103 aaKnown RBP11.82□□□□□ -0.52
SCLT1-208ENST00000506368 M0QY20 66 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 SPRY2O43597 315 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 DNAJC30Q96LL9 226 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 SIRPDQ9H106 197 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 ZNF256Q9Y2P7 627 aaPredicted RBP11.82□□□□□ -0.52
SCLT1-208ENST00000506368 CSMD2Q7Z408 3487 aa11.82□□□□□ -0.52
SCLT1-208ENST00000506368 TACC2O95359 2948 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 UQCRQO14949 82 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 LINC00643Q86TS7 51 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 C9orf85Q96MD7 179 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 EDA2RQ9HAV5 297 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
SCLT1-208ENST00000506368 PTPN13Q12923 2485 aa11.8□□□□□ -0.52
SCLT1-208ENST00000506368 G3V318 75 aa11.8□□□□□ -0.52
SCLT1-208ENST00000506368 CXCL5P42830 114 aa11.8□□□□□ -0.52
SCLT1-208ENST00000506368 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
SCLT1-208ENST00000506368 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
SCLT1-208ENST00000506368 A0A0J9YXV3 536 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 H3BUA1 57 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 ID1P41134 155 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 C19orf54Q5BKX5 351 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 C3orf22Q8N5N4 141 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 TRAV41A0A0B4J266 112 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 PRSS2P07478 247 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms