RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 C10orf99Q6UWK7 81 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 UTP20O75691 2785 aaKnown RBP8.8□□□□□ -1
UBE3D-206ENST00000505226 ZNF688P0C7X2 276 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 CUBNO60494 3623 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 ZNF56Q15929 161 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 TRAV26-1A0A087WT03 109 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 H3BUA1 57 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 LGALS3P17931 250 aaKnown RBP8.79□□□□□ -1
UBE3D-206ENST00000505226 CFHR3Q02985 330 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 TMEM263Q8WUH6 116 aaKnown RBP8.79□□□□□ -1
UBE3D-206ENST00000505226 FAM104AQ969W3 186 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 ZANQ9Y493 2812 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 CSPG4Q6UVK1 2322 aa8.79□□□□□ -1
UBE3D-206ENST00000505226 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 A0A0J9YXV3 536 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 H7C2G1 150 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 IGHV3-33P01772 117 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
UBE3D-206ENST00000505226 MUSTN1Q8IVN3 82 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
UBE3D-206ENST00000505226 A8MWV9 139 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 DOPEY2Q9Y3R5 2298 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 TRAV2A0A0B4J234 112 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 NSUN5P1Q3KNT7 163 aa8.78□□□□□ -1
UBE3D-206ENST00000505226 ADARB2-AS1A8MUL3 147 aa8.77□□□□□ -1.01
UBE3D-206ENST00000505226 LEPROTO15243 131 aa8.77□□□□□ -1.01
UBE3D-206ENST00000505226 RHODO00212 210 aa8.77□□□□□ -1.01
UBE3D-206ENST00000505226 LY6DQ14210 128 aa8.77□□□□□ -1.01
UBE3D-206ENST00000505226 SPINK13Q1W4C9 94 aa8.77□□□□□ -1.01
UBE3D-206ENST00000505226 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
UBE3D-206ENST00000505226 AVPP01185 164 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 Q9UF83 564 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 A0A0J9YX75 114 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 C9JAW5 83 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 ID1P41134 155 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 K7EMT4 169 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 SLC25A20O43772 301 aa8.76□□□□□ -1.01
UBE3D-206ENST00000505226 PROK1P58294 105 aa8.75□□□□□ -1.01
UBE3D-206ENST00000505226 CEMP1Q6PRD7 247 aaPredicted RBP8.75□□□□□ -1.01
UBE3D-206ENST00000505226 MXRA5Q9NR99 2828 aa8.75□□□□□ -1.01
UBE3D-206ENST00000505226 PRM2P04554 102 aa8.75□□□□□ -1.01
UBE3D-206ENST00000505226 GATA3P23771 443 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 RHOHQ15669 191 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 LITAFQ99732 161 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 IGHV1OR15-1A0A075B7D0 117 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
UBE3D-206ENST00000505226 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
UBE3D-206ENST00000505226 FLNCQ14315 2725 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 M0R2P5 195 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 PSMB8P28062 276 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 RNASE13Q5GAN3 156 aaKnown RBP8.74□□□□□ -1.01
UBE3D-206ENST00000505226 SPXQ9BT56 116 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 ERG28Q9UKR5 140 aa8.74□□□□□ -1.01
UBE3D-206ENST00000505226 CFAP46Q8IYW2 2715 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 I3L3M4 83 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 ADAMTSL4-AS1Q5T5F5 129 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 IGHV4-30-2A0A087WSY4 118 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 A0A0B4J2C4 111 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 VCX2Q9H322 139 aa8.73□□□□□ -1.01
UBE3D-206ENST00000505226 PRRC2AP48634 2157 aaKnown RBP8.73□□□□□ -1.01
UBE3D-206ENST00000505226 A8MZ25 164 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 K7EQG2 157 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 Q6ZSV7 163 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 C10orf105Q8TEF2 133 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 RNF183Q96D59 192 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 CREBBPQ92793 2442 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 UCNP55089 124 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 DUX5Q96PT3 197 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
UBE3D-206ENST00000505226 BEX4Q9NWD9 120 aaPredicted RBP8.72□□□□□ -1.01
UBE3D-206ENST00000505226 TRIAP1O43715 76 aa8.71□□□□□ -1.02
UBE3D-206ENST00000505226 PIMREGQ9BSJ6 248 aa8.71□□□□□ -1.02
UBE3D-206ENST00000505226 CRLF1O75462 422 aa8.71□□□□□ -1.02
UBE3D-206ENST00000505226 HTN1P15515 57 aa8.71□□□□□ -1.02
UBE3D-206ENST00000505226 NTN5Q8WTR8 489 aaPredicted RBP8.71□□□□□ -1.02
UBE3D-206ENST00000505226 CITED1Q99966 193 aa8.71□□□□□ -1.02
UBE3D-206ENST00000505226 IGHV4-59P01825 116 aa8.7□□□□□ -1.02
UBE3D-206ENST00000505226 SYNJ2BPP57105 145 aa8.7□□□□□ -1.02
UBE3D-206ENST00000505226 Q6ZSN1 163 aa8.7□□□□□ -1.02
UBE3D-206ENST00000505226 NACAE9PAV3 2078 aa8.7□□□□□ -1.02
UBE3D-206ENST00000505226 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
UBE3D-206ENST00000505226 SNRPD3P62318 126 aaKnown RBP8.7□□□□□ -1.02
UBE3D-206ENST00000505226 GNLYP22749 145 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 LINC01620Q4KN68 170 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 M0QXV9 152 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
UBE3D-206ENST00000505226 Q1RN00 199 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 MSMBP08118 114 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 CD28P10747 220 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 NPC2P61916 151 aa8.69□□□□□ -1.02
UBE3D-206ENST00000505226 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms