RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 LYSTQ99698 3801 aa10.71□□□□□ -0.69
GAPDHP40-201ENST00000505218 F5H697 171 aa10.71□□□□□ -0.69
GAPDHP40-201ENST00000505218 MGPP08493 103 aa10.71□□□□□ -0.69
GAPDHP40-201ENST00000505218 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
GAPDHP40-201ENST00000505218 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
GAPDHP40-201ENST00000505218 GNB1LQ9BYB4 327 aa10.71□□□□□ -0.69
GAPDHP40-201ENST00000505218 SACSQ9NZJ4 4579 aa10.71□□□□□ -0.7
GAPDHP40-201ENST00000505218 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 TRBV6-5A0A0K0K1A5 114 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 H7C1H1 209 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 TIRAPP58753 221 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 UBE2D3P61077 147 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 UBE2D2P62837 147 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 COX19Q49B96 90 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 NIT2Q9NQR4 276 aa10.7□□□□□ -0.7
GAPDHP40-201ENST00000505218 SH2D6Q7Z4S9 175 aa10.69□□□□□ -0.7
GAPDHP40-201ENST00000505218 NRACQ8N912 160 aa10.69□□□□□ -0.7
GAPDHP40-201ENST00000505218 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 NUDT3O95989 172 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 RPS10P46783 165 aaKnown RBP10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 GAGE1Q13065 139 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 GAGE4Q13068 117 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 GAGE5Q13069 117 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 DNAH6Q9C0G6 4158 aa10.68□□□□□ -0.7
GAPDHP40-201ENST00000505218 HLA-DQA1P01909 254 aa10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 PPBPP02775 128 aa10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 SRIP30626 198 aa10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 ESRGQ1W209 222 aa10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
GAPDHP40-201ENST00000505218 KMT2CQ8NEZ4 4911 aaKnown RBP10.66□□□□□ -0.7
GAPDHP40-201ENST00000505218 COLCA2A8K830 154 aa10.66□□□□□ -0.7
GAPDHP40-201ENST00000505218 MT-ND6P03923 174 aa10.66□□□□□ -0.7
GAPDHP40-201ENST00000505218 POLR2KP53803 58 aaKnown RBP10.66□□□□□ -0.7
GAPDHP40-201ENST00000505218 ATP6V0E2Q8NHE4 81 aa10.66□□□□□ -0.7
GAPDHP40-201ENST00000505218 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 SMKR1H3BMG3 65 aa10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 PHOX2AO14813 284 aa10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 SCO1O75880 301 aa10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 LGALS9CQ6DKI2 356 aa10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 GTSF1LQ9H1H1 148 aa10.65□□□□□ -0.7
GAPDHP40-201ENST00000505218 D6R8Y8 96 aa10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 NCR2O95944 276 aa10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 PPP1R17O96001 155 aa10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 DAZ4Q86SG3 579 aaKnown RBP10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 UPK3BQ9BT76 320 aa10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 DAZ3Q9NR90 486 aaKnown RBP10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
GAPDHP40-201ENST00000505218 APCSP02743 223 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 CKS2P33552 79 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 C20orf78Q9BR46 151 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
GAPDHP40-201ENST00000505218 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 NPYP01303 97 aa10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 NTM-AS1Q6ZSK4 140 aa10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 MRPL18Q9H0U6 180 aaKnown RBP10.62□□□□□ -0.71
GAPDHP40-201ENST00000505218 RYR2Q92736 4967 aa10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 CCL18P55774 89 aa10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 LELP1Q5T871 98 aa10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 LINC00476Q8WZB0 136 aa10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 ST20Q9HBF5 79 aa10.61□□□□□ -0.71
GAPDHP40-201ENST00000505218 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
GAPDHP40-201ENST00000505218 ALKBH7Q9BT30 221 aaPredicted RBP10.6□□□□□ -0.71
GAPDHP40-201ENST00000505218 KMT2AQ03164 3969 aa10.6□□□□□ -0.71
GAPDHP40-201ENST00000505218 TRBV6-8A0A0A6YYG3 113 aa10.59□□□□□ -0.71
GAPDHP40-201ENST00000505218 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
GAPDHP40-201ENST00000505218 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
GAPDHP40-201ENST00000505218 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
GAPDHP40-201ENST00000505218 TRAPPC1Q9Y5R8 145 aa10.59□□□□□ -0.71
GAPDHP40-201ENST00000505218 RAB5AP20339 215 aa10.58□□□□□ -0.72
GAPDHP40-201ENST00000505218 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
GAPDHP40-201ENST00000505218 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
GAPDHP40-201ENST00000505218 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
GAPDHP40-201ENST00000505218 I3L3M4 83 aa10.57□□□□□ -0.72
GAPDHP40-201ENST00000505218 VCYO14598 125 aa10.57□□□□□ -0.72
GAPDHP40-201ENST00000505218 TSHBP01222 138 aa10.57□□□□□ -0.72
GAPDHP40-201ENST00000505218 SMIM2Q9BVW6 85 aa10.57□□□□□ -0.72
GAPDHP40-201ENST00000505218 LCE6AA0A183 80 aa10.56□□□□□ -0.72
GAPDHP40-201ENST00000505218 ESDP10768 282 aa10.56□□□□□ -0.72
GAPDHP40-201ENST00000505218 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
GAPDHP40-201ENST00000505218 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
GAPDHP40-201ENST00000505218 CHCHD7Q9BUK0 85 aa10.55□□□□□ -0.72
GAPDHP40-201ENST00000505218 DNAH10OSP0CZ25 163 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms