RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.61
SNCAIP-207ENST00000504884 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 SAP30O75446 220 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 PRM2P04554 102 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 GAGE1Q13065 139 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 TMEM97Q5BJF2 176 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 NF1P21359 2839 aa11.26□□□□□ -0.61
SNCAIP-207ENST00000504884 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 RHOHQ15669 191 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 CUBNO60494 3623 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 I3L3M4 83 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 XCL2Q9UBD3 114 aa11.25□□□□□ -0.61
SNCAIP-207ENST00000504884 UFSP1Q6NVU6 142 aa11.24□□□□□ -0.61
SNCAIP-207ENST00000504884 COX11Q9Y6N1 276 aa11.24□□□□□ -0.61
SNCAIP-207ENST00000504884 IGLV1-51P01701 117 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 SEC11AP67812 179 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 HSD52Q0P140 79 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 BEAN1Q3B7T3 259 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
SNCAIP-207ENST00000504884 RHODO00212 210 aa11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 TSHBP01222 138 aa11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 PMVKQ15126 192 aa11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 DEFB104AQ8WTQ1 72 aa11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
SNCAIP-207ENST00000504884 IGHV3-73A0A0B4J1V6 119 aa11.21□□□□□ -0.61
SNCAIP-207ENST00000504884 PAPPA-AS1Q5QFB9 102 aa11.21□□□□□ -0.61
SNCAIP-207ENST00000504884 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
SNCAIP-207ENST00000504884 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
SNCAIP-207ENST00000504884 NDUFA11Q86Y39 141 aa11.21□□□□□ -0.62
SNCAIP-207ENST00000504884 TNFRSF18Q9Y5U5 241 aa11.21□□□□□ -0.62
SNCAIP-207ENST00000504884 FASNP49327 2511 aaKnown RBP11.2□□□□□ -0.62
SNCAIP-207ENST00000504884 MTORP42345 2549 aa11.2□□□□□ -0.62
SNCAIP-207ENST00000504884 P0DMU3 169 aa11.2□□□□□ -0.62
SNCAIP-207ENST00000504884 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
SNCAIP-207ENST00000504884 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
SNCAIP-207ENST00000504884 CST9LQ9H4G1 147 aa11.2□□□□□ -0.62
SNCAIP-207ENST00000504884 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 RS1O15537 224 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 AZU1P20160 251 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 TRAV8-6A0A0B4J262 113 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 A6NDN8 102 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 Q6ZVH6 145 aa11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
SNCAIP-207ENST00000504884 IGHV3-53P01767 116 aa11.18□□□□□ -0.62
SNCAIP-207ENST00000504884 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
SNCAIP-207ENST00000504884 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
SNCAIP-207ENST00000504884 E9PLD3 99 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 GCN1Q92616 2671 aaKnown RBP11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 KRTAP10-3P60369 221 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 Q6ZSN1 163 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 IL17DQ8TAD2 202 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 CHAC1Q9BUX1 264 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 C19orf73Q9NVV2 129 aa11.17□□□□□ -0.62
SNCAIP-207ENST00000504884 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
SNCAIP-207ENST00000504884 NPSP0C0P6 89 aa11.16□□□□□ -0.62
SNCAIP-207ENST00000504884 RNASE8Q8TDE3 154 aaKnown RBP11.16□□□□□ -0.62
SNCAIP-207ENST00000504884 INAFM1C9JVW0 142 aa11.15□□□□□ -0.62
SNCAIP-207ENST00000504884 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
SNCAIP-207ENST00000504884 C1QTNF4Q9BXJ3 329 aa11.15□□□□□ -0.62
SNCAIP-207ENST00000504884 MYMXA0A1B0GTQ4 84 aa11.15□□□□□ -0.63
SNCAIP-207ENST00000504884 C11orf86A6NJI1 115 aa11.15□□□□□ -0.63
SNCAIP-207ENST00000504884 PF4P02776 101 aa11.15□□□□□ -0.63
SNCAIP-207ENST00000504884 GIG44P09565 113 aaPredicted RBP11.15□□□□□ -0.63
SNCAIP-207ENST00000504884 PYGO1Q9Y3Y4 419 aa11.15□□□□□ -0.63
SNCAIP-207ENST00000504884 H3BRM9 83 aa11.14□□□□□ -0.63
SNCAIP-207ENST00000504884 HERVK_113P61574 105 aa11.14□□□□□ -0.63
SNCAIP-207ENST00000504884 UBE2V1Q13404 147 aa11.14□□□□□ -0.63
SNCAIP-207ENST00000504884 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
SNCAIP-207ENST00000504884 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
SNCAIP-207ENST00000504884 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
SNCAIP-207ENST00000504884 TRGV1A0A0A0MS02 117 aa11.13□□□□□ -0.63
SNCAIP-207ENST00000504884 TAL2Q16559 108 aa11.13□□□□□ -0.63
SNCAIP-207ENST00000504884 VCX2Q9H322 139 aa11.13□□□□□ -0.63
SNCAIP-207ENST00000504884 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
SNCAIP-207ENST00000504884 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 VAMP3Q15836 100 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 LINC00482Q8N8I6 264 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 Q9UF83 564 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 FOSL1P15407 271 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 RPL35AP18077 110 aaKnown RBP11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 GCSHP23434 173 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 CRYBA4P53673 196 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms