RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 NUPR2A6NF83 97 aa9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 NCR2O95944 276 aa9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 GYPEP15421 78 aa9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 PRELID3AQ96N28 172 aa9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 KLK5Q9Y337 293 aaPredicted RBP9.69□□□□□ -0.86
CYSTM1-202ENST00000504227 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 IGLL5B9A064 214 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 GAGE1Q13065 139 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 GAGE4Q13068 117 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 GAGE5Q13069 117 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 GAGE13Q4V321 117 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 NEXN-AS1Q8NBZ9 246 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 Q9UF83 564 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 LAMTOR2Q9Y2Q5 125 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
CYSTM1-202ENST00000504227 TRBV7-3A0A075B6L6 115 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 TNFRSF6BO95407 300 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 NRACQ8N912 160 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 C15orf53Q8NAA6 179 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 DNAH7Q8WXX0 4024 aa9.67□□□□□ -0.86
CYSTM1-202ENST00000504227 TRBV6-5A0A0K0K1A5 114 aa9.66□□□□□ -0.86
CYSTM1-202ENST00000504227 PHOX2AO14813 284 aa9.66□□□□□ -0.86
CYSTM1-202ENST00000504227 NUDT3O95989 172 aa9.66□□□□□ -0.86
CYSTM1-202ENST00000504227 TRGC2P03986 189 aa9.66□□□□□ -0.86
CYSTM1-202ENST00000504227 SRIP30626 198 aa9.66□□□□□ -0.86
CYSTM1-202ENST00000504227 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
CYSTM1-202ENST00000504227 NPYP01303 97 aa9.65□□□□□ -0.86
CYSTM1-202ENST00000504227 ZFAND6Q6FIF0 208 aa9.65□□□□□ -0.86
CYSTM1-202ENST00000504227 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
CYSTM1-202ENST00000504227 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
CYSTM1-202ENST00000504227 A0A096LPF7 62 aa9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 UBE2D3P61077 147 aa9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 UBE2D2P62837 147 aa9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
CYSTM1-202ENST00000504227 VCYO14598 125 aa9.63□□□□□ -0.87
CYSTM1-202ENST00000504227 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
CYSTM1-202ENST00000504227 TCTAP57738 103 aa9.63□□□□□ -0.87
CYSTM1-202ENST00000504227 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
CYSTM1-202ENST00000504227 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
CYSTM1-202ENST00000504227 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
CYSTM1-202ENST00000504227 PMCHP20382 165 aa9.62□□□□□ -0.87
CYSTM1-202ENST00000504227 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
CYSTM1-202ENST00000504227 RPL32P62910 135 aaKnown RBP9.62□□□□□ -0.87
CYSTM1-202ENST00000504227 LOC389332A0A1B0GUA5 103 aa9.61□□□□□ -0.87
CYSTM1-202ENST00000504227 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
CYSTM1-202ENST00000504227 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
CYSTM1-202ENST00000504227 I3L3M4 83 aa9.61□□□□□ -0.87
CYSTM1-202ENST00000504227 GTSF1LQ9H1H1 148 aa9.61□□□□□ -0.87
CYSTM1-202ENST00000504227 APLNQ9ULZ1 77 aa9.61□□□□□ -0.87
CYSTM1-202ENST00000504227 IGHV3-38A0A0C4DH36 116 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 TRBV27A0A0K0K1C4 114 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 C1orf196B1AJZ1 125 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 PRSS3P2Q8NHM4 247 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 KIR2DL4Q99706 377 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 NXT2Q9NPJ8 142 aaKnown RBP9.6□□□□□ -0.87
CYSTM1-202ENST00000504227 TCAPO15273 167 aa9.59□□□□□ -0.87
CYSTM1-202ENST00000504227 COTL1Q14019 142 aa9.59□□□□□ -0.87
CYSTM1-202ENST00000504227 Q8N8P6 123 aa9.59□□□□□ -0.87
CYSTM1-202ENST00000504227 C18orf32Q8TCD1 76 aa9.59□□□□□ -0.87
CYSTM1-202ENST00000504227 DYNC2H1Q8NCM8 4307 aaKnown RBP9.59□□□□□ -0.87
CYSTM1-202ENST00000504227 FCER1GP30273 86 aa9.58□□□□□ -0.88
CYSTM1-202ENST00000504227 TIRAPP58753 221 aa9.58□□□□□ -0.88
CYSTM1-202ENST00000504227 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
CYSTM1-202ENST00000504227 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
CYSTM1-202ENST00000504227 IFI27P40305 119 aaPredicted RBP9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 CCL18P55774 89 aa9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 RAB5BP61020 215 aa9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 ESRGQ1W209 222 aa9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 CASC10Q5T4H9 136 aa9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 FA2HQ7L5A8 372 aa9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 DEFB104AQ8WTQ1 72 aa9.57□□□□□ -0.88
CYSTM1-202ENST00000504227 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 TSHBP01222 138 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 Q0VG73 95 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 LELP1Q5T871 98 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 NIT1Q86X76 327 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 BAGE3Q86Y29 109 aa9.56□□□□□ -0.88
CYSTM1-202ENST00000504227 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 IGHV1-24A0A0C4DH33 117 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 K7EMI3 77 aa9.55□□□□□ -0.88
CYSTM1-202ENST00000504227 HIST1H2BKO60814 126 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms