RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 GAGE12GP0CL81 117 aa3.6□□□□□ -1.83
NDFIP1-202ENST00000503388 GAGE12IP0CL82 117 aa3.6□□□□□ -1.83
NDFIP1-202ENST00000503388 IGFL4Q6B9Z1 124 aa3.6□□□□□ -1.83
NDFIP1-202ENST00000503388 NDUFA1O15239 70 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 RPL35AP18077 110 aaKnown RBP3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 C15orf53Q8NAA6 179 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 WNK2Q9Y3S1 2297 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 GNRH2O43555 120 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 LY6HO94772 140 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 NXPH4O95158 308 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 ZFP36P26651 326 aaKnown RBP3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 SPRNQ5BIV9 151 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 UBE2DNLQ8IWF7 75 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 ZFAND2AQ8N6M9 145 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 KRTAP3-3Q9BYR6 98 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 Q9H8V8 135 aa3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 CSDC2Q9Y534 153 aaKnown RBP3.59□□□□□ -1.83
NDFIP1-202ENST00000503388 IGKV3D-20A0A0C4DH25 116 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 G3V4G9 280 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 WISP2O76076 250 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 IGLV2-11P01706 119 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 MIFP14174 115 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 GAGE6Q13070 117 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 C9orf85Q96MD7 179 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 FAM240AA0A1B0GVK7 77 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 KNCNA6PVL3 124 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 F5H768 121 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 FUSP35637 526 aaKnown RBP eCLIP3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 COX17Q14061 63 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 C9orf153Q5TBE3 101 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 GAGE2AQ6NT46 116 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 SND1-IT1Q9HBX3 110 aa3.59□□□□□ -1.84
NDFIP1-202ENST00000503388 FREM1Q5H8C1 2179 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 IGHV4-38-2P0DP08 117 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 HTN3P15516 51 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 PSMB8P28062 276 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 FOXI1Q12951 378 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 HIST2H2BCQ6DN03 193 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 HIST2H2BDQ6DRA6 164 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 CEP250Q9BV73 2442 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 C1orf43Q9BWL3 253 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 PPDPFQ9H3Y8 114 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 MAP6D1Q9H9H5 199 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 BPTFQ12830 3046 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 LINC01546A6NGU7 62 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 E7EUB6 86 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 NUPR1O60356 82 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 RNASE1P07998 156 aaKnown RBP3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 PCP2Q8IVA1 136 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 CADP27708 2225 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 MED13Q9UHV7 2174 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 PCNX3Q9H6A9 2034 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 TANC2Q9HCD6 1990 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 MRPS12O15235 138 aaKnown RBP3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 TMEM258P61165 79 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 MAJINQ3KP22 176 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 Q6Q795 121 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 RITA1Q96K30 269 aa3.58□□□□□ -1.84
NDFIP1-202ENST00000503388 DIDO1Q9BTC0 2240 aaKnown RBP3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 TRAV26-2A0A0B4J265 109 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 TMEM223A0PJW6 202 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 DEFB130BP0DP73 79 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 DEFB130AP0DP74 79 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 DEFB114Q30KQ6 69 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 NTN5Q8WTR8 489 aaPredicted RBP3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 EP300Q09472 2414 aaPredicted RBP3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 A0A0J9YXV3 536 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 ANGP03950 147 aaKnown RBP3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 IGHV3-30-3P0DP02 117 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 CCL18P55774 89 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 CFHR3Q02985 330 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 PRB3Q04118 309 aaPredicted RBP3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 MUSTN1Q8IVN3 82 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 RNF185Q96GF1 192 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 HCFC1P51610 2035 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 IGHV3-64A0A075B6Q5 118 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 IGHV3-73A0A0B4J1V6 119 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 M0QY20 66 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 PSCAO43653 123 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 APRG1Q8IVJ8 170 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 DAND5Q8N907 189 aa3.57□□□□□ -1.84
NDFIP1-202ENST00000503388 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 PRAC2D3DTV9 90 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 BLCAPP62952 87 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 RPL39LQ96EH5 51 aaKnown RBP3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 DPH3Q96FX2 82 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 NOP10Q9NPE3 64 aaKnown RBP3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 HHLA3Q9XRX5 114 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 SPTBN1Q01082 2364 aaKnown RBP3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 IGHV4-31P0DP07 118 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 FXYD7P58549 80 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 ASPHD1Q5U4P2 390 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 PKDREJQ9NTG1 2253 aa3.56□□□□□ -1.84
NDFIP1-202ENST00000503388 NDUFC1O43677 76 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms