RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 FBXL15Q9H469 300 aa3.87□□□□□ -1.79
HTT-202ENST00000502820 PLECQ15149 4684 aaKnown RBP3.87□□□□□ -1.79
HTT-202ENST00000502820 ALMS1Q8TCU4 4167 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 TRBV19A0A075B6N1 114 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 A0A0J9YWU9 116 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 A0A1B0GX51 115 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 RBAKDNA6NC62 111 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 PRSS29PA6NIE9 313 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 NDUFA3O95167 84 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 IGLV2-11P01706 119 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 ACYP1P07311 99 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 ELANEP08246 267 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 LGALS1P09382 135 aaKnown RBP3.86□□□□□ -1.79
HTT-202ENST00000502820 IGLC6P0CF74 106 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 P0DMU3 169 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 PSMB8P28062 276 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 HLA-DMBP28068 263 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 CRIP2P52943 208 aaPredicted RBP3.86□□□□□ -1.79
HTT-202ENST00000502820 XGP55808 180 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 GNG5P63218 68 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 FOXE3Q13461 319 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
HTT-202ENST00000502820 C19orf54Q5BKX5 351 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 MORN3Q6PF18 240 aaPredicted RBP3.86□□□□□ -1.79
HTT-202ENST00000502820 SH2D6Q7Z4S9 175 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 ZNF575Q86XF7 245 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 NPIPB3Q92617 1050 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 FLYWCH2Q96CP2 140 aaKnown RBP3.86□□□□□ -1.79
HTT-202ENST00000502820 RNF5Q99942 180 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 RASL11BQ9BPW5 248 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 MDFICQ9P1T7 246 aa3.86□□□□□ -1.79
HTT-202ENST00000502820 F11RQ9Y624 299 aaKnown RBP3.86□□□□□ -1.79
HTT-202ENST00000502820 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.85□□□□□ -1.79
HTT-202ENST00000502820 IGHV7-81A0A0B4J1V7 117 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 H3BRN7 92 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 H3BT86 120 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 M0R2N4 97 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 SNAI2O43623 268 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 IGHV3-11P01762 117 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 MT-ATP8P03928 68 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 PPIFP30405 207 aaKnown RBP3.85□□□□□ -1.79
HTT-202ENST00000502820 NDPQ00604 133 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 LAGE3Q14657 143 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 TM4SF20Q53R12 229 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 C5orf47Q569G3 176 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 ASPHD1Q5U4P2 390 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 MORN5Q5VZ52 161 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 LYZL1Q6UWQ5 148 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 LINC00322Q6ZN03 302 aaPredicted RBP3.85□□□□□ -1.79
HTT-202ENST00000502820 GOLT1AQ6ZVE7 132 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 PRNTQ86SH4 94 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 VKORC1L1Q8N0U8 176 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 NPBQ8NG41 125 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 ZC2HC1AQ96GY0 325 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 NAA38Q9BRA0 125 aaKnown RBP3.85□□□□□ -1.79
HTT-202ENST00000502820 SHANK2-AS3Q9BTD1 123 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 KLK15Q9H2R5 256 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 SS18L2Q9UHA2 77 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 UFC1Q9Y3C8 167 aa3.85□□□□□ -1.79
HTT-202ENST00000502820 IGHV4-4A0A075B6R2 117 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 IGHV4OR15-8A0A075B7B6 117 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 A0A087WW49 117 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 A0A0B4J2C4 111 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 TRBV7-7A0A0K0K1E9 115 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 B5MCH6 92 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 G3V318 75 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 K7ERJ3 54 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 M0R381 172 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 LCE2BO14633 110 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 ATP6V0E1O15342 81 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 NBR2O15453 112 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 TNFRSF6BO95407 300 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 IGLV1-40P01703 118 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.79
HTT-202ENST00000502820 EGR2P11161 476 aaPredicted RBP3.84□□□□□ -1.79
HTT-202ENST00000502820 RPL7P18124 248 aaKnown RBP3.84□□□□□ -1.79
HTT-202ENST00000502820 ORM2P19652 201 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 LEPP41159 167 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 ZNF138P52744 262 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
HTT-202ENST00000502820 HERV-K104P63124 156 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 TMEM78Q5T7P6 136 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 SIGLEC15Q6ZMC9 328 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 LINC00336Q6ZUF6 198 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 C10orf126Q8N4M7 172 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 MRPL53Q96EL3 112 aaKnown RBP3.84□□□□□ -1.79
HTT-202ENST00000502820 DNAJC30Q96LL9 226 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 SLC50A1Q9BRV3 221 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 DKK2Q9UBU2 259 aa3.84□□□□□ -1.79
HTT-202ENST00000502820 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 IGKV2D-26A0A0A0MRZ7 120 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 TRAV41A0A0B4J266 112 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 A8MZ25 164 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 IGKV1-16P04430 117 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 RPL27AP46776 148 aaKnown RBP3.83□□□□□ -1.8
HTT-202ENST00000502820 LINC00205P59089 165 aa3.83□□□□□ -1.8
HTT-202ENST00000502820 WT1-ASQ06250 92 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms