RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 C18orf32Q8TCD1 76 aa17.04■□□□□ 0.32
TNFRSF4-203ENST00000497869 ATP5G1P05496 136 aa17.02■□□□□ 0.32
TNFRSF4-203ENST00000497869 TMA7Q9Y2S6 64 aaKnown RBP17.02■□□□□ 0.32
TNFRSF4-203ENST00000497869 HTN3P15516 51 aa17.01■□□□□ 0.31
TNFRSF4-203ENST00000497869 NEXN-AS1Q8NBZ9 246 aa17.01■□□□□ 0.31
TNFRSF4-203ENST00000497869 CIDEAO60543 219 aa17.01■□□□□ 0.31
TNFRSF4-203ENST00000497869 URB1-AS1Q96HZ7 61 aa17.01■□□□□ 0.31
TNFRSF4-203ENST00000497869 HHLA3Q9XRX5 114 aa17.01■□□□□ 0.31
TNFRSF4-203ENST00000497869 K7EQD1 137 aa17■□□□□ 0.31
TNFRSF4-203ENST00000497869 CRYBA4P53673 196 aa17■□□□□ 0.31
TNFRSF4-203ENST00000497869 OR10J3Q5JRS4 329 aa17■□□□□ 0.31
TNFRSF4-203ENST00000497869 VSIG2Q96IQ7 327 aa17■□□□□ 0.31
TNFRSF4-203ENST00000497869 TRBV6-4A0A1B0GX49 114 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 LINC00310P59036 64 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 NIT2Q9NQR4 276 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 LOC389332A0A1B0GUA5 103 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 F5H768 121 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 RAB5BP61020 215 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 NEGR1Q7Z3B1 354 aa16.99■□□□□ 0.31
TNFRSF4-203ENST00000497869 TRBV6-5A0A0K0K1A5 114 aa16.98■□□□□ 0.31
TNFRSF4-203ENST00000497869 LAMTOR2Q9Y2Q5 125 aa16.98■□□□□ 0.31
TNFRSF4-203ENST00000497869 IGLV2-18A0A075B6J9 118 aa16.97■□□□□ 0.31
TNFRSF4-203ENST00000497869 Q0VG73 95 aa16.97■□□□□ 0.31
TNFRSF4-203ENST00000497869 DEFB104AQ8WTQ1 72 aa16.97■□□□□ 0.31
TNFRSF4-203ENST00000497869 A0A0J9YY99 117 aa16.96■□□□□ 0.31
TNFRSF4-203ENST00000497869 NUPR1O60356 82 aa16.96■□□□□ 0.31
TNFRSF4-203ENST00000497869 SUMO2P61956 95 aaKnown RBP16.96■□□□□ 0.31
TNFRSF4-203ENST00000497869 PRO0255Q9UI72 69 aa16.96■□□□□ 0.31
TNFRSF4-203ENST00000497869 TRAV26-1A0A087WT03 109 aa16.96■□□□□ 0.3
TNFRSF4-203ENST00000497869 PRSS47A8MTI9 375 aa16.96■□□□□ 0.3
TNFRSF4-203ENST00000497869 H7C1H1 209 aa16.96■□□□□ 0.3
TNFRSF4-203ENST00000497869 IFI27P40305 119 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF4-203ENST00000497869 POLR2KP53803 58 aaKnown RBP16.96■□□□□ 0.3
TNFRSF4-203ENST00000497869 DNAH7Q8WXX0 4024 aa16.95■□□□□ 0.3
TNFRSF4-203ENST00000497869 TMEM70Q9BUB7 260 aa16.95■□□□□ 0.3
TNFRSF4-203ENST00000497869 TRBV10-1A0A0K0K1A3 114 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 GAGE12JA6NER3 117 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 SDHAF1A6NFY7 115 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 GAGE1Q13065 139 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 GAGE4Q13068 117 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 GAGE5Q13069 117 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 RHOHQ15669 191 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 GAGE13Q4V321 117 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 ZNRF2Q8NHG8 242 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 C20orf78Q9BR46 151 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 ST20Q9HBF5 79 aa16.94■□□□□ 0.3
TNFRSF4-203ENST00000497869 LINC00694P0DN24 101 aa16.93■□□□□ 0.3
TNFRSF4-203ENST00000497869 NDUFA6P56556 154 aa16.93■□□□□ 0.3
TNFRSF4-203ENST00000497869 MAP1LC3AQ9H492 121 aa16.93■□□□□ 0.3
TNFRSF4-203ENST00000497869 SMIM2Q9BVW6 85 aa16.93■□□□□ 0.3
TNFRSF4-203ENST00000497869 DYNC2H1Q8NCM8 4307 aaKnown RBP16.92■□□□□ 0.3
TNFRSF4-203ENST00000497869 PAX4O43316 350 aa16.92■□□□□ 0.3
TNFRSF4-203ENST00000497869 NIT1Q86X76 327 aa16.92■□□□□ 0.3
TNFRSF4-203ENST00000497869 DEFB131BA0A096LNP1 70 aa16.91■□□□□ 0.3
TNFRSF4-203ENST00000497869 PPP1R17O96001 155 aa16.91■□□□□ 0.3
TNFRSF4-203ENST00000497869 GYPEP15421 78 aa16.91■□□□□ 0.3
TNFRSF4-203ENST00000497869 TNFRSF18Q9Y5U5 241 aa16.91■□□□□ 0.3
TNFRSF4-203ENST00000497869 TRBV7-3A0A075B6L6 115 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 IGHV3-38A0A0C4DH36 116 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 SERF1AO75920 110 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 UBE2D3P61077 147 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 UBE2D2P62837 147 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 COA6Q5JTJ3 125 aaKnown RBP16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 DNAJC30Q96LL9 226 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 PRADC1Q9BSG0 188 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 TRBV27A0A0K0K1C4 114 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 BAGE3Q86Y29 109 aa16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 PHLDA1Q8WV24 401 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF4-203ENST00000497869 Q8N8P6 123 aa16.89■□□□□ 0.29
TNFRSF4-203ENST00000497869 TCAPO15273 167 aa16.88■□□□□ 0.29
TNFRSF4-203ENST00000497869 RPL32P62910 135 aaKnown RBP16.88■□□□□ 0.29
TNFRSF4-203ENST00000497869 RPL36AP83881 106 aaKnown RBP16.88■□□□□ 0.29
TNFRSF4-203ENST00000497869 PRSS3P2Q8NHM4 247 aa16.88■□□□□ 0.29
TNFRSF4-203ENST00000497869 RPL36ALQ969Q0 106 aaKnown RBP16.88■□□□□ 0.29
TNFRSF4-203ENST00000497869 LINC00614P0C842 121 aa16.87■□□□□ 0.29
TNFRSF4-203ENST00000497869 CSMD3Q7Z407 3707 aa16.87■□□□□ 0.29
TNFRSF4-203ENST00000497869 TRAV10A0A0B4J240 114 aa16.86■□□□□ 0.29
TNFRSF4-203ENST00000497869 LINC01546A6NGU7 62 aa16.86■□□□□ 0.29
TNFRSF4-203ENST00000497869 VCYO14598 125 aa16.86■□□□□ 0.29
TNFRSF4-203ENST00000497869 TSHBP01222 138 aa16.86■□□□□ 0.29
TNFRSF4-203ENST00000497869 RNASEKQ6P5S7 137 aaKnown RBP16.86■□□□□ 0.29
TNFRSF4-203ENST00000497869 A0A096LPF7 62 aa16.85■□□□□ 0.29
TNFRSF4-203ENST00000497869 NXT2Q9NPJ8 142 aaKnown RBP16.85■□□□□ 0.29
TNFRSF4-203ENST00000497869 TGP01266 2768 aa16.85■□□□□ 0.29
TNFRSF4-203ENST00000497869 STARD9Q9P2P6 4700 aa16.85■□□□□ 0.29
TNFRSF4-203ENST00000497869 PMCHL1Q16048 86 aa16.84■□□□□ 0.29
TNFRSF4-203ENST00000497869 PMCHP20382 165 aa16.84■□□□□ 0.29
TNFRSF4-203ENST00000497869 SNRPEP62304 92 aaKnown RBP16.84■□□□□ 0.29
TNFRSF4-203ENST00000497869 I3L3M4 83 aa16.83■□□□□ 0.28
TNFRSF4-203ENST00000497869 NTM-AS1Q6ZSK4 140 aa16.83■□□□□ 0.28
TNFRSF4-203ENST00000497869 FA2HQ7L5A8 372 aa16.83■□□□□ 0.28
TNFRSF4-203ENST00000497869 A0A096LNJ9 63 aa16.82■□□□□ 0.28
TNFRSF4-203ENST00000497869 C5orf52A6NGY3 159 aa16.82■□□□□ 0.28
TNFRSF4-203ENST00000497869 PLECQ15149 4684 aaKnown RBP16.82■□□□□ 0.28
TNFRSF4-203ENST00000497869 PDZD11Q5EBL8 140 aa16.82■□□□□ 0.28
TNFRSF4-203ENST00000497869 FAM19A2Q8N3H0 131 aa16.82■□□□□ 0.28
TNFRSF4-203ENST00000497869 AP5S1Q9NUS5 200 aa16.82■□□□□ 0.28
TNFRSF4-203ENST00000497869 ESDP10768 282 aa16.81■□□□□ 0.28
TNFRSF4-203ENST00000497869 H3BNG1 76 aa16.8■□□□□ 0.28
TNFRSF4-203ENST00000497869 DAZ4Q86SG3 579 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms