RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 ESDP10768 282 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 IQCJQ1A5X6 159 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 FAM222AQ5U5X8 452 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 BAGE3Q86Y29 109 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
VPS26A-209ENST00000497564 RYR2Q92736 4967 aa10.06□□□□□ -0.8
VPS26A-209ENST00000497564 TRGV2A0A075B6R0 118 aa10.06□□□□□ -0.8
VPS26A-209ENST00000497564 HOXA5P20719 270 aa10.06□□□□□ -0.8
VPS26A-209ENST00000497564 LINC00310P59036 64 aa10.06□□□□□ -0.8
VPS26A-209ENST00000497564 SNRPEP62304 92 aaKnown RBP10.06□□□□□ -0.8
VPS26A-209ENST00000497564 RPL32P62910 135 aaKnown RBP10.06□□□□□ -0.8
VPS26A-209ENST00000497564 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
VPS26A-209ENST00000497564 PLECQ15149 4684 aaKnown RBP10.05□□□□□ -0.8
VPS26A-209ENST00000497564 SERF1AO75920 110 aa10.05□□□□□ -0.8
VPS26A-209ENST00000497564 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
VPS26A-209ENST00000497564 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
VPS26A-209ENST00000497564 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
VPS26A-209ENST00000497564 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
VPS26A-209ENST00000497564 URB1-AS1Q96HZ7 61 aa10.05□□□□□ -0.8
VPS26A-209ENST00000497564 LYSTQ99698 3801 aa10.05□□□□□ -0.8
VPS26A-209ENST00000497564 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
VPS26A-209ENST00000497564 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
VPS26A-209ENST00000497564 DEFB4AO15263 64 aa10.04□□□□□ -0.8
VPS26A-209ENST00000497564 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
VPS26A-209ENST00000497564 Q6ZSN1 163 aa10.04□□□□□ -0.8
VPS26A-209ENST00000497564 NIT1Q86X76 327 aa10.04□□□□□ -0.8
VPS26A-209ENST00000497564 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
VPS26A-209ENST00000497564 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
VPS26A-209ENST00000497564 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 Q8N8P6 123 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 ST20Q9HBF5 79 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
VPS26A-209ENST00000497564 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 TRBV6-4A0A1B0GX49 114 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 NUPR1O60356 82 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 LINC00614P0C842 121 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 PMCHP20382 165 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-209ENST00000497564 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
VPS26A-209ENST00000497564 DAD1P61803 113 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 FHL2Q14192 279 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
VPS26A-209ENST00000497564 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 LOC389332A0A1B0GUA5 103 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 K7EMI3 77 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 K7EQD1 137 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 ZFAND6Q6FIF0 208 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
VPS26A-209ENST00000497564 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-209ENST00000497564 TMEM70Q9BUB7 260 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
VPS26A-209ENST00000497564 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
VPS26A-209ENST00000497564 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
VPS26A-209ENST00000497564 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
VPS26A-209ENST00000497564 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
VPS26A-209ENST00000497564 VCYO14598 125 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 HSBP1O75506 76 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 ATP5G1P05496 136 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 P0DMU3 169 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 FAM231AP0DMU4 169 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 FAM231CP0DMU5 169 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 RHOHQ15669 191 aa9.99□□□□□ -0.81
VPS26A-209ENST00000497564 A0A0J9YWU9 116 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 LOC105371267A0A1B0GV96 52 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 S100A2P29034 98 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
VPS26A-209ENST00000497564 TCAPO15273 167 aa9.97□□□□□ -0.81
VPS26A-209ENST00000497564 PDZD11Q5EBL8 140 aa9.97□□□□□ -0.81
VPS26A-209ENST00000497564 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
VPS26A-209ENST00000497564 Q9UF83 564 aa9.97□□□□□ -0.81
VPS26A-209ENST00000497564 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
VPS26A-209ENST00000497564 HHLA3Q9XRX5 114 aa9.97□□□□□ -0.81
VPS26A-209ENST00000497564 HYDINQ4G0P3 5121 aa9.96□□□□□ -0.81
VPS26A-209ENST00000497564 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 AMTP48728 403 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 CRYBA4P53673 196 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 RPL36AP83881 106 aaKnown RBP9.96□□□□□ -0.82
VPS26A-209ENST00000497564 LAGE3Q14657 143 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 ORMDL2Q53FV1 153 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 RPL36ALQ969Q0 106 aaKnown RBP9.96□□□□□ -0.82
VPS26A-209ENST00000497564 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.82
VPS26A-209ENST00000497564 ALMS1Q8TCU4 4167 aa9.95□□□□□ -0.82
VPS26A-209ENST00000497564 I3L3M4 83 aa9.95□□□□□ -0.82
VPS26A-209ENST00000497564 UBE2D3P61077 147 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms