RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
MSH5-219ENST00000497269 VPS13BQ7Z7G8 4022 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 A0A1W2PPV4 95 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 FBLL1A6NHQ2 334 aaKnown RBP3.88□□□□□ -1.79
MSH5-219ENST00000497269 H2BFSP57053 126 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 CFAP126Q5VTH2 177 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 PRNTQ86SH4 94 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 AKAP14Q86UN6 197 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 ATP6V0E2Q8NHE4 81 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 PPP1R1CQ8WVI7 109 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 ASB13Q8WXK3 278 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 ATP5SQ99766 215 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 SAMD10Q9BYL1 202 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 OTORQ9NRC9 128 aa3.88□□□□□ -1.79
MSH5-219ENST00000497269 TRAV21A0A0B4J279 112 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 RBAKDNA6NC62 111 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 INMT-MINDY4F8WBC2 141 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 RS1O15537 224 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 SSNA1O43805 119 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 GCGP01275 180 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 IGLV2-8P01709 118 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 RPL12P30050 165 aaKnown RBP3.87□□□□□ -1.79
MSH5-219ENST00000497269 IFITM3Q01628 133 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 LGALSLQ3ZCW2 172 aaPredicted RBP3.87□□□□□ -1.79
MSH5-219ENST00000497269 KHDC3LQ587J8 217 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 C14orf178Q8N769 122 aaPredicted RBP3.87□□□□□ -1.79
MSH5-219ENST00000497269 ENKURQ8TC29 256 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 PRADC1Q9BSG0 188 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 HSPB11Q9Y547 144 aa3.87□□□□□ -1.79
MSH5-219ENST00000497269 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 RBFOX3A6NFN3 312 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 MPC2O95563 127 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 PFN1P07737 140 aaKnown RBP3.86□□□□□ -1.79
MSH5-219ENST00000497269 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 TAS2R45P59539 299 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 SSTP61278 116 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 TDRG1Q3Y452 100 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 FAM74A1Q5RGS3 127 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 HSD17B11Q8NBQ5 300 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 OR10G9Q8NGN4 311 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 TMEM70Q9BUB7 260 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 GTSF1LQ9H1H1 148 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 PSG8Q9UQ74 426 aa3.86□□□□□ -1.79
MSH5-219ENST00000497269 IGKV2D-24A0A075B6R9 120 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 TMSB15BA0A087X1C1 80 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 TRBV7-9A0A0J9YWB2 115 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 M0R036 132 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 RNASE3P12724 160 aaKnown RBP3.85□□□□□ -1.79
MSH5-219ENST00000497269 S100A4P26447 101 aaKnown RBP3.85□□□□□ -1.79
MSH5-219ENST00000497269 UBE2G2P60604 165 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 ASAH1Q13510 395 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 RHOHQ15669 191 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 ACOT6Q3I5F7 207 aaPredicted RBP3.85□□□□□ -1.79
MSH5-219ENST00000497269 LELP1Q5T871 98 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 FAM74A4Q5TZK3 123 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 SCXQ7RTU7 201 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 GTSF1Q8WW33 167 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 KCNS1Q96KK3 526 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 SH3BGRL3Q9H299 93 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 KCNIP2Q9NS61 270 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 LENEPQ9Y5L5 61 aa3.85□□□□□ -1.79
MSH5-219ENST00000497269 MUC21A0A0G2JKD1 596 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 MUC21A0A140T8X8 626 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 TRBV6-4A0A1B0GX49 114 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 H3BVH4 76 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 TAAR5O14804 337 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 TCRAP04437 139 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 GCHFRP30047 84 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 CDC34P49427 236 aaPredicted RBP3.84□□□□□ -1.79
MSH5-219ENST00000497269 FLI1Q01543 452 aaPredicted RBP3.84□□□□□ -1.79
MSH5-219ENST00000497269 LINC00242Q5T6M2 205 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 SH2D6Q7Z4S9 175 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 C9orf85Q96MD7 179 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 NDFIP1Q9BT67 221 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 EPDR1Q9UM22 224 aa3.84□□□□□ -1.79
MSH5-219ENST00000497269 GGTLC3B5MD39 225 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 TMEM262E9PQX1 116 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 K7EP13 123 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 M0R381 172 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 IFNA7P01567 189 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 MGST1P10620 155 aaKnown RBP3.83□□□□□ -1.8
MSH5-219ENST00000497269 FGF8P55075 233 aaPredicted RBP3.83□□□□□ -1.8
MSH5-219ENST00000497269 SMUG1Q53HV7 270 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 Q5BKY6 102 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
MSH5-219ENST00000497269 TCTE3Q8IZS6 198 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 CIRBP-AS1Q8TBR5 109 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 URGCP-MRPS24S4R325 110 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
MSH5-219ENST00000497269 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 A0A0U1RRA0 63 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 B4DEV8 164 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 K7EQM0 130 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 ARMS2P0C7Q2 107 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 STAG3L2P0CL84 134 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms