RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 AMTNQ6UX39 209 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 SLURP1P55000 103 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 TMEM141Q96I45 108 aa11.03□□□□□ -0.64
UBXN11-216ENST00000496466 M0QY20 66 aa11.02□□□□□ -0.64
UBXN11-216ENST00000496466 SMAGPQ0VAQ4 97 aa11.02□□□□□ -0.64
UBXN11-216ENST00000496466 PMVKQ15126 192 aa11.02□□□□□ -0.64
UBXN11-216ENST00000496466 ZNF56Q15929 161 aa11.02□□□□□ -0.64
UBXN11-216ENST00000496466 SPATA25Q9BR10 227 aa11.02□□□□□ -0.64
UBXN11-216ENST00000496466 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
UBXN11-216ENST00000496466 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
UBXN11-216ENST00000496466 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.65
UBXN11-216ENST00000496466 TIMM17AQ99595 171 aa11.02□□□□□ -0.65
UBXN11-216ENST00000496466 IGLL5B9A064 214 aa11.01□□□□□ -0.65
UBXN11-216ENST00000496466 DUX3Q96PT4 197 aa11.01□□□□□ -0.65
UBXN11-216ENST00000496466 ZNF256Q9Y2P7 627 aaPredicted RBP11.01□□□□□ -0.65
UBXN11-216ENST00000496466 CCDC168Q8NDH2 2452 aa11.01□□□□□ -0.65
UBXN11-216ENST00000496466 J3QR89 54 aa11.01□□□□□ -0.65
UBXN11-216ENST00000496466 SONP18583 2426 aaKnown RBP11.01□□□□□ -0.65
UBXN11-216ENST00000496466 ZNF815PA8K554 130 aa11□□□□□ -0.65
UBXN11-216ENST00000496466 EMP1P54849 157 aa11□□□□□ -0.65
UBXN11-216ENST00000496466 PAPPA-AS1Q5QFB9 102 aa11□□□□□ -0.65
UBXN11-216ENST00000496466 TSSC4Q9Y5U2 329 aaPredicted RBP11□□□□□ -0.65
UBXN11-216ENST00000496466 MYO9AB2RTY4 2548 aa11□□□□□ -0.65
UBXN11-216ENST00000496466 ZNF876PQ49A33 203 aa11□□□□□ -0.65
UBXN11-216ENST00000496466 TRPT1Q86TN4 253 aaKnown RBP11□□□□□ -0.65
UBXN11-216ENST00000496466 TRGV11A0A075B6L2 103 aa10.99□□□□□ -0.65
UBXN11-216ENST00000496466 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
UBXN11-216ENST00000496466 RBMY1A1P0DJD3 496 aaKnown RBP10.99□□□□□ -0.65
UBXN11-216ENST00000496466 RBMY1CP0DJD4 496 aa10.99□□□□□ -0.65
UBXN11-216ENST00000496466 SCGB2A2Q13296 93 aa10.99□□□□□ -0.65
UBXN11-216ENST00000496466 RBMY1FQ15415 496 aaKnown RBP10.99□□□□□ -0.65
UBXN11-216ENST00000496466 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
UBXN11-216ENST00000496466 SORL1Q92673 2214 aa10.99□□□□□ -0.65
UBXN11-216ENST00000496466 A0A1B0GWB2 263 aa10.98□□□□□ -0.65
UBXN11-216ENST00000496466 F8W1H4 67 aa10.98□□□□□ -0.65
UBXN11-216ENST00000496466 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
UBXN11-216ENST00000496466 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
UBXN11-216ENST00000496466 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
UBXN11-216ENST00000496466 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
UBXN11-216ENST00000496466 HERVK_113P61574 105 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 RHOHQ15669 191 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 NSUN5P1Q3KNT7 163 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 ZNF479Q96JC4 524 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 FLNAP21333 2647 aaKnown RBP10.97□□□□□ -0.65
UBXN11-216ENST00000496466 DEFB131AP59861 70 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 Q6ZSV7 163 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 ZNRF2Q8NHG8 242 aa10.97□□□□□ -0.65
UBXN11-216ENST00000496466 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
UBXN11-216ENST00000496466 DNAJC9-AS1A6NH13 148 aa10.96□□□□□ -0.65
UBXN11-216ENST00000496466 P0DMU3 169 aa10.96□□□□□ -0.65
UBXN11-216ENST00000496466 FAM231AP0DMU4 169 aa10.96□□□□□ -0.65
UBXN11-216ENST00000496466 FAM231CP0DMU5 169 aa10.96□□□□□ -0.65
UBXN11-216ENST00000496466 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
UBXN11-216ENST00000496466 C4orf3Q8WVX3 66 aa10.96□□□□□ -0.65
UBXN11-216ENST00000496466 A8MTW9 85 aa10.96□□□□□ -0.66
UBXN11-216ENST00000496466 CKS1BP61024 79 aa10.96□□□□□ -0.66
UBXN11-216ENST00000496466 RRN3P1Q2M238 152 aa10.96□□□□□ -0.66
UBXN11-216ENST00000496466 TMEM86BQ8N661 226 aa10.96□□□□□ -0.66
UBXN11-216ENST00000496466 J3QKU1 62 aa10.95□□□□□ -0.66
UBXN11-216ENST00000496466 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
UBXN11-216ENST00000496466 PDZD2O15018 2839 aa10.95□□□□□ -0.66
UBXN11-216ENST00000496466 RBMY1BA6NDE4 496 aaKnown RBP10.95□□□□□ -0.66
UBXN11-216ENST00000496466 RBMY1EA6NEQ0 496 aaKnown RBP10.95□□□□□ -0.66
UBXN11-216ENST00000496466 H3BMM0 161 aa10.95□□□□□ -0.66
UBXN11-216ENST00000496466 I3L3M4 83 aa10.95□□□□□ -0.66
UBXN11-216ENST00000496466 RBMY1DP0C7P1 496 aaKnown RBP10.95□□□□□ -0.66
UBXN11-216ENST00000496466 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
UBXN11-216ENST00000496466 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
UBXN11-216ENST00000496466 ESM1Q9NQ30 184 aa10.95□□□□□ -0.66
UBXN11-216ENST00000496466 HTN1P15515 57 aa10.94□□□□□ -0.66
UBXN11-216ENST00000496466 C20orf203Q8NBC4 194 aa10.94□□□□□ -0.66
UBXN11-216ENST00000496466 TSPEAR-AS2P59090 65 aa10.93□□□□□ -0.66
UBXN11-216ENST00000496466 KRTAP1-1Q07627 177 aa10.93□□□□□ -0.66
UBXN11-216ENST00000496466 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
UBXN11-216ENST00000496466 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
UBXN11-216ENST00000496466 NFE4Q86UQ8 179 aa10.93□□□□□ -0.66
UBXN11-216ENST00000496466 TMEM61Q8N0U2 210 aa10.93□□□□□ -0.66
UBXN11-216ENST00000496466 A0A0J9YY99 117 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 C11orf44Q8N8P7 122 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 SPAG8Q99932 426 aaPredicted RBP10.92□□□□□ -0.66
UBXN11-216ENST00000496466 PEMTQ9UBM1 199 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 PRM2P04554 102 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 WFDC2Q14508 124 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 TEX29Q8N6K0 151 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 AKAP9Q99996 3911 aa10.92□□□□□ -0.66
UBXN11-216ENST00000496466 PROK1P58294 105 aa10.91□□□□□ -0.66
UBXN11-216ENST00000496466 MTURNQ8N3F0 131 aa10.91□□□□□ -0.66
UBXN11-216ENST00000496466 TRAV26-1A0A087WT03 109 aa10.91□□□□□ -0.66
UBXN11-216ENST00000496466 A6NJY4 79 aa10.91□□□□□ -0.66
UBXN11-216ENST00000496466 UBE2D1P51668 147 aa10.91□□□□□ -0.66
UBXN11-216ENST00000496466 YAE1D1Q9NRH1 226 aa10.91□□□□□ -0.66
UBXN11-216ENST00000496466 HELZ2Q9BYK8 2649 aaKnown RBP10.9□□□□□ -0.66
UBXN11-216ENST00000496466 ACANP16112 2415 aa10.9□□□□□ -0.66
UBXN11-216ENST00000496466 CRYBA4P53673 196 aa10.9□□□□□ -0.66
UBXN11-216ENST00000496466 AMELXQ99217 191 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms