RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RBFOX3A6NFN3 312 aa10.45□□□□□ -0.74
HDAC4-213ENST00000496347 PKIAP61925 76 aa10.45□□□□□ -0.74
HDAC4-213ENST00000496347 CACNG7P62955 275 aa10.45□□□□□ -0.74
HDAC4-213ENST00000496347 TMEM70Q9BUB7 260 aa10.45□□□□□ -0.74
HDAC4-213ENST00000496347 TPPP3Q9BW30 176 aa10.45□□□□□ -0.74
HDAC4-213ENST00000496347 RAB19A4D1S5 217 aa10.44□□□□□ -0.74
HDAC4-213ENST00000496347 F5H697 171 aa10.44□□□□□ -0.74
HDAC4-213ENST00000496347 TMEM97Q5BJF2 176 aa10.44□□□□□ -0.74
HDAC4-213ENST00000496347 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
HDAC4-213ENST00000496347 FAT1Q14517 4588 aa10.43□□□□□ -0.74
HDAC4-213ENST00000496347 F2Z2F3 143 aa10.43□□□□□ -0.74
HDAC4-213ENST00000496347 H7C1H1 209 aa10.43□□□□□ -0.74
HDAC4-213ENST00000496347 GZMBP10144 247 aa10.43□□□□□ -0.74
HDAC4-213ENST00000496347 XGP55808 180 aa10.43□□□□□ -0.74
HDAC4-213ENST00000496347 CTRLP40313 264 aa10.42□□□□□ -0.74
HDAC4-213ENST00000496347 ATRAIDQ6UW56 229 aa10.42□□□□□ -0.74
HDAC4-213ENST00000496347 KLK12Q9UKR0 248 aa10.42□□□□□ -0.74
HDAC4-213ENST00000496347 hCG_2014768A0A024R1R8 64 aa10.41□□□□□ -0.74
HDAC4-213ENST00000496347 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
HDAC4-213ENST00000496347 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
HDAC4-213ENST00000496347 SSTP61278 116 aa10.41□□□□□ -0.74
HDAC4-213ENST00000496347 Q0VG73 95 aa10.41□□□□□ -0.74
HDAC4-213ENST00000496347 WFDC2Q14508 124 aa10.41□□□□□ -0.74
HDAC4-213ENST00000496347 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 TMEM250H0YL14 139 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 MGPP08493 103 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 BLOC1S1P78537 153 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 ALKAL2Q6UX46 152 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 UBE2WQ96B02 151 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
HDAC4-213ENST00000496347 M0QY20 66 aa10.39□□□□□ -0.75
HDAC4-213ENST00000496347 CRPP02741 224 aa10.39□□□□□ -0.75
HDAC4-213ENST00000496347 MPV17L2Q567V2 206 aa10.39□□□□□ -0.75
HDAC4-213ENST00000496347 CHCHD5Q9BSY4 110 aa10.39□□□□□ -0.75
HDAC4-213ENST00000496347 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
HDAC4-213ENST00000496347 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 TMEM262E9PQX1 116 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 WDR73Q6P4I2 378 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 LYPD6BQ8NI32 183 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 FRZBQ92765 325 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
HDAC4-213ENST00000496347 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
HDAC4-213ENST00000496347 LECT2O14960 151 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 IQCJQ1A5X6 159 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 Q5VSD8 79 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 LYZL1Q6UWQ5 148 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 C15orf54Q8N8G6 183 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 Q8N976 141 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
HDAC4-213ENST00000496347 DMBT1Q9UGM3 2413 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-213ENST00000496347 VPS13BQ7Z7G8 4022 aa10.36□□□□□ -0.75
HDAC4-213ENST00000496347 K7EN84 100 aa10.36□□□□□ -0.75
HDAC4-213ENST00000496347 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
HDAC4-213ENST00000496347 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
HDAC4-213ENST00000496347 NTM-AS1Q6ZSK4 140 aa10.36□□□□□ -0.75
HDAC4-213ENST00000496347 BAALCQ8WXS3 180 aa10.36□□□□□ -0.75
HDAC4-213ENST00000496347 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
HDAC4-213ENST00000496347 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
HDAC4-213ENST00000496347 IGHV1-24A0A0C4DH33 117 aa10.35□□□□□ -0.75
HDAC4-213ENST00000496347 NDUFS6O75380 124 aaKnown RBP10.35□□□□□ -0.75
HDAC4-213ENST00000496347 NTF3P20783 257 aa10.35□□□□□ -0.75
HDAC4-213ENST00000496347 MIAQ16674 131 aa10.35□□□□□ -0.75
HDAC4-213ENST00000496347 C14orf177Q52M58 125 aa10.35□□□□□ -0.75
HDAC4-213ENST00000496347 Q6ZSA8 131 aa10.35□□□□□ -0.75
HDAC4-213ENST00000496347 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.34□□□□□ -0.75
HDAC4-213ENST00000496347 ENHOQ6UWT2 76 aa10.34□□□□□ -0.75
HDAC4-213ENST00000496347 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
HDAC4-213ENST00000496347 PGLYRP4Q96LB8 373 aa10.34□□□□□ -0.75
HDAC4-213ENST00000496347 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
HDAC4-213ENST00000496347 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
HDAC4-213ENST00000496347 RBX1P62877 108 aa10.33□□□□□ -0.76
HDAC4-213ENST00000496347 TWIST1Q15672 202 aa10.33□□□□□ -0.76
HDAC4-213ENST00000496347 CT83Q5H943 113 aa10.33□□□□□ -0.76
HDAC4-213ENST00000496347 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
HDAC4-213ENST00000496347 NIT2Q9NQR4 276 aa10.32□□□□□ -0.76
HDAC4-213ENST00000496347 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
HDAC4-213ENST00000496347 HAMPP81172 84 aa10.31□□□□□ -0.76
HDAC4-213ENST00000496347 GAGE6Q13070 117 aa10.31□□□□□ -0.76
HDAC4-213ENST00000496347 GTSF1Q8WW33 167 aa10.31□□□□□ -0.76
HDAC4-213ENST00000496347 TMEM243Q9BU79 118 aa10.31□□□□□ -0.76
HDAC4-213ENST00000496347 FLG2Q5D862 2391 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-213ENST00000496347 A8MWL6 223 aa10.3□□□□□ -0.76
HDAC4-213ENST00000496347 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
HDAC4-213ENST00000496347 HLA-DQA1P01909 254 aa10.3□□□□□ -0.76
HDAC4-213ENST00000496347 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
HDAC4-213ENST00000496347 SMIM7Q9BQ49 75 aa10.3□□□□□ -0.76
HDAC4-213ENST00000496347 FAM30AQ9NZY2 134 aa10.3□□□□□ -0.76
HDAC4-213ENST00000496347 A0A1B0GUV1 79 aa10.29□□□□□ -0.76
HDAC4-213ENST00000496347 GATCO43716 136 aaKnown RBP10.29□□□□□ -0.76
HDAC4-213ENST00000496347 CEBPGP53567 150 aa10.29□□□□□ -0.76
HDAC4-213ENST00000496347 COTL1Q14019 142 aa10.29□□□□□ -0.76
HDAC4-213ENST00000496347 TEX261Q6UWH6 196 aa10.29□□□□□ -0.76
HDAC4-213ENST00000496347 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
HDAC4-213ENST00000496347 FAM210AQ96ND0 272 aa10.29□□□□□ -0.76
HDAC4-213ENST00000496347 EIF5A2Q9GZV4 153 aaKnown RBP10.29□□□□□ -0.76
HDAC4-213ENST00000496347 USP17L23D6RBM5 183 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms