RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 M0R3E3 92 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 SPINK4O60575 86 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 MPDU1O75352 247 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 IL5P05113 134 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 OR5G3P0C626 314 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 HTN1P15515 57 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 CRISP2P16562 243 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 PVALBP20472 110 aaPredicted RBP2.78□□□□□ -1.96
VPS52-222ENST00000495981 FAUP35544 74 aaKnown RBP2.78□□□□□ -1.96
VPS52-222ENST00000495981 RAB5CP51148 216 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 RRAS2P62070 204 aaPredicted RBP2.78□□□□□ -1.96
VPS52-222ENST00000495981 RHOBP62745 196 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 COX19Q49B96 90 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 C5orf47Q569G3 176 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 IBA57Q5T440 356 aaKnown RBP2.78□□□□□ -1.96
VPS52-222ENST00000495981 TRIQKQ629K1 86 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 Q6ZQT7 251 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 Q6ZSA8 131 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 LINC00305Q7Z4B0 112 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 WFDC10BQ8IUB3 73 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 ZFAND2AQ8N6M9 145 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 ASB13Q8WXK3 278 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 SMIM8Q96KF7 97 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 SCGB3A2Q96PL1 93 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 PYGO2Q9BRQ0 406 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 NKX6-2Q9C056 277 aaPredicted RBP2.78□□□□□ -1.96
VPS52-222ENST00000495981 SRRQ9GZT4 340 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 ARL6Q9H0F7 186 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 C11orf1Q9H5F2 150 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 ZFP30Q9Y2G7 519 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 IGKV2-40A0A087WW87 121 aaPredicted RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 TRGV1A0A0A0MS02 117 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 A0A1B0GW15 77 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 TMEM218A2RU14 115 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 C1orf196B1AJZ1 125 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 BCL2L11O43521 198 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 ZNF324O75467 553 aaPredicted RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 NDUFB6O95139 128 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 IGKV2D-40P01614 121 aaPredicted RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 TCRBP04435 133 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 S100A7P31151 101 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 CRYBA4P53673 196 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 RPL19P84098 196 aaKnown RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 HIGD2BQ4VC39 106 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 PYY3Q5JQD4 70 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 GCSAMLQ5JQS6 135 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 C10orf91Q5T1B1 145 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 ZFP82Q8N141 532 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 Q8TAT8 98 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 ZNF431Q8TF32 576 aaPredicted RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 ORAOV1Q8WV07 137 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 SLC25A21Q9BQT8 299 aaPredicted RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 TMEM70Q9BUB7 260 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 MRPL16Q9NX20 251 aaKnown RBP2.77□□□□□ -1.97
VPS52-222ENST00000495981 TP53TG3Q9ULZ0 132 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 KLF12Q9Y4X4 402 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 HSPB11Q9Y547 144 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 PXMP4Q9Y6I8 212 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 ICOSQ9Y6W8 199 aa2.77□□□□□ -1.97
VPS52-222ENST00000495981 TRBV19A0A075B6N1 114 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 TRGV2A0A075B6R0 118 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 TRAV5A0A0B4J249 113 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 UBE2L5PA0A1B0GUS4 154 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 C7orf66A4D0T2 115 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 A6NDN8 102 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 K7EN84 100 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 K7ERU9 68 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 COX7A2P2O60397 106 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 IFNA5P01569 189 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 IGHV3-53P01767 116 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 SLC25A5P05141 298 aaKnown RBP2.76□□□□□ -1.97
VPS52-222ENST00000495981 PYYP10082 97 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 AKR1C3P42330 323 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 TAS2R30P59541 319 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 ERCC8Q13216 396 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 RAB31Q13636 194 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 WFDC2Q14508 124 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 C9orf129Q5T035 196 aaKnown RBP2.76□□□□□ -1.97
VPS52-222ENST00000495981 LINC01551Q86U37 167 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 BPIFA4PQ86YQ2 179 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 SVBPQ8N300 66 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 TOMM5Q8N4H5 51 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 OR2G3Q8NGZ4 309 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 MCFD2Q8NI22 146 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 RNF185Q96GF1 192 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 SDHCQ99643 169 aaPredicted RBP2.76□□□□□ -1.97
VPS52-222ENST00000495981 VPS25Q9BRG1 176 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 SNHG12Q9BXW3 62 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 PSENENQ9NZ42 101 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 PRO0255Q9UI72 69 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 URGCP-MRPS24S4R325 110 aa2.76□□□□□ -1.97
VPS52-222ENST00000495981 FAM168BA1KXE4 195 aa2.75□□□□□ -1.97
VPS52-222ENST00000495981 C20orf202A1L168 122 aa2.75□□□□□ -1.97
VPS52-222ENST00000495981 IGSF23A1L1A6 192 aa2.75□□□□□ -1.97
VPS52-222ENST00000495981 SMLR1H3BR10 107 aa2.75□□□□□ -1.97
VPS52-222ENST00000495981 H7C1H1 209 aa2.75□□□□□ -1.97
VPS52-222ENST00000495981 M0R036 132 aa2.75□□□□□ -1.97
VPS52-222ENST00000495981 LINC00694P0DN24 101 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms