RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CACNG7P62955 275 aa16.08■□□□□ 0.16
HLA-C-209ENST00000495835 AKAP14Q86UN6 197 aa16.08■□□□□ 0.16
HLA-C-209ENST00000495835 FER1L6-AS1Q8NA97 138 aa16.08■□□□□ 0.16
HLA-C-209ENST00000495835 OR2D3Q8NGH3 330 aa16.08■□□□□ 0.16
HLA-C-209ENST00000495835 P01737 135 aa16.07■□□□□ 0.16
HLA-C-209ENST00000495835 MUC21A0A0G2JKD1 596 aa16.06■□□□□ 0.16
HLA-C-209ENST00000495835 MUC21A0A140T8X8 626 aa16.06■□□□□ 0.16
HLA-C-209ENST00000495835 RBFOX3A6NFN3 312 aa16.06■□□□□ 0.16
HLA-C-209ENST00000495835 EPM2AB3EWF7 344 aa16.06■□□□□ 0.16
HLA-C-209ENST00000495835 Q0VG73 95 aa16.06■□□□□ 0.16
HLA-C-209ENST00000495835 KLK12Q9UKR0 248 aa16.06■□□□□ 0.16
HLA-C-209ENST00000495835 TRBV20OR9-2A0A075B6H5 130 aa16.05■□□□□ 0.16
HLA-C-209ENST00000495835 ATRAIDQ6UW56 229 aa16.04■□□□□ 0.16
HLA-C-209ENST00000495835 C9orf62Q8N4C0 152 aa16.04■□□□□ 0.16
HLA-C-209ENST00000495835 DNAJC30Q96LL9 226 aa16.04■□□□□ 0.16
HLA-C-209ENST00000495835 FAT1Q14517 4588 aa16.03■□□□□ 0.16
HLA-C-209ENST00000495835 H7C1H1 209 aa16.03■□□□□ 0.16
HLA-C-209ENST00000495835 GZMBP10144 247 aa16.03■□□□□ 0.16
HLA-C-209ENST00000495835 SSTP61278 116 aa16.03■□□□□ 0.16
HLA-C-209ENST00000495835 BLOC1S1P78537 153 aa16.03■□□□□ 0.16
HLA-C-209ENST00000495835 WDR73Q6P4I2 378 aa16.03■□□□□ 0.16
HLA-C-209ENST00000495835 TMEM262E9PQX1 116 aa16.02■□□□□ 0.16
HLA-C-209ENST00000495835 UBE2WQ96B02 151 aa16.02■□□□□ 0.16
HLA-C-209ENST00000495835 TPPP3Q9BW30 176 aa16.02■□□□□ 0.16
HLA-C-209ENST00000495835 IGKV2D-24A0A075B6R9 120 aa16.01■□□□□ 0.15
HLA-C-209ENST00000495835 TRGC1P0CF51 173 aa16.01■□□□□ 0.15
HLA-C-209ENST00000495835 Q8N976 141 aa16.01■□□□□ 0.15
HLA-C-209ENST00000495835 FRZBQ92765 325 aa16.01■□□□□ 0.15
HLA-C-209ENST00000495835 DNAH8Q96JB1 4490 aa16■□□□□ 0.15
HLA-C-209ENST00000495835 WFDC2Q14508 124 aa16■□□□□ 0.15
HLA-C-209ENST00000495835 NUDT10Q8NFP7 164 aa16■□□□□ 0.15
HLA-C-209ENST00000495835 NUDT11Q96G61 164 aa16■□□□□ 0.15
HLA-C-209ENST00000495835 M0QY20 66 aa15.99■□□□□ 0.15
HLA-C-209ENST00000495835 BAALCQ8WXS3 180 aa15.99■□□□□ 0.15
HLA-C-209ENST00000495835 TMEM250H0YL14 139 aa15.98■□□□□ 0.15
HLA-C-209ENST00000495835 LYZL1Q6UWQ5 148 aa15.98■□□□□ 0.15
HLA-C-209ENST00000495835 LYPD6BQ8NI32 183 aa15.98■□□□□ 0.15
HLA-C-209ENST00000495835 CHCHD5Q9BSY4 110 aa15.98■□□□□ 0.15
HLA-C-209ENST00000495835 NTF3P20783 257 aa15.97■□□□□ 0.15
HLA-C-209ENST00000495835 NTM-AS1Q6ZSK4 140 aa15.97■□□□□ 0.15
HLA-C-209ENST00000495835 CNFNQ9BYD5 112 aa15.97■□□□□ 0.15
HLA-C-209ENST00000495835 TRBV25-1A0A075B6N4 114 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 CRPP02741 224 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 MGPP08493 103 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 CTRLP40313 264 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 MPV17L2Q567V2 206 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 OCC1Q8TAD7 63 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 C1orf43Q9BWL3 253 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 DPH3P1Q9H4G8 78 aa15.96■□□□□ 0.15
HLA-C-209ENST00000495835 LECT2O14960 151 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 IQCJQ1A5X6 159 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 Q5VSD8 79 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 SUMO4Q6EEV6 95 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 RASL11AQ6T310 242 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 ENHOQ6UWT2 76 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 ALKAL2Q6UX46 152 aa15.95■□□□□ 0.14
HLA-C-209ENST00000495835 RPP21Q9H633 154 aaKnown RBP15.95■□□□□ 0.14
HLA-C-209ENST00000495835 NDUFS6O75380 124 aaKnown RBP15.94■□□□□ 0.14
HLA-C-209ENST00000495835 ANGP03950 147 aaKnown RBP15.94■□□□□ 0.14
HLA-C-209ENST00000495835 MIAQ16674 131 aa15.94■□□□□ 0.14
HLA-C-209ENST00000495835 C15orf54Q8N8G6 183 aa15.94■□□□□ 0.14
HLA-C-209ENST00000495835 hCG_2014768A0A024R1R8 64 aa15.93■□□□□ 0.14
HLA-C-209ENST00000495835 IGHV1-24A0A0C4DH33 117 aa15.93■□□□□ 0.14
HLA-C-209ENST00000495835 FAM229AH3BQW9 127 aa15.93■□□□□ 0.14
HLA-C-209ENST00000495835 C14orf177Q52M58 125 aa15.93■□□□□ 0.14
HLA-C-209ENST00000495835 NIT2Q9NQR4 276 aa15.93■□□□□ 0.14
HLA-C-209ENST00000495835 VPS13BQ7Z7G8 4022 aa15.93■□□□□ 0.14
HLA-C-209ENST00000495835 K7EN84 100 aa15.92■□□□□ 0.14
HLA-C-209ENST00000495835 Q6ZSA8 131 aa15.92■□□□□ 0.14
HLA-C-209ENST00000495835 PRR34Q9NV39 138 aa15.92■□□□□ 0.14
HLA-C-209ENST00000495835 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.91■□□□□ 0.14
HLA-C-209ENST00000495835 PGLYRP4Q96LB8 373 aa15.91■□□□□ 0.14
HLA-C-209ENST00000495835 RNASE7Q9H1E1 156 aaKnown RBP15.91■□□□□ 0.14
HLA-C-209ENST00000495835 RBX1P62877 108 aa15.9■□□□□ 0.14
HLA-C-209ENST00000495835 TWIST1Q15672 202 aa15.9■□□□□ 0.14
HLA-C-209ENST00000495835 FAM231DQ6ZW35 169 aa15.9■□□□□ 0.14
HLA-C-209ENST00000495835 FAM30AQ9NZY2 134 aa15.9■□□□□ 0.14
HLA-C-209ENST00000495835 SMR3BP02814 79 aaPredicted RBP15.89■□□□□ 0.13
HLA-C-209ENST00000495835 INAFM2P0DMQ5 153 aa15.89■□□□□ 0.13
HLA-C-209ENST00000495835 NKX2-5P52952 324 aaPredicted RBP15.88■□□□□ 0.13
HLA-C-209ENST00000495835 SRRM2Q9UQ35 2752 aaKnown RBP15.88■□□□□ 0.13
HLA-C-209ENST00000495835 A0A1B0GUV1 79 aa15.87■□□□□ 0.13
HLA-C-209ENST00000495835 GAGE6Q13070 117 aa15.87■□□□□ 0.13
HLA-C-209ENST00000495835 A8MWL6 223 aa15.86■□□□□ 0.13
HLA-C-209ENST00000495835 GATCO43716 136 aaKnown RBP15.86■□□□□ 0.13
HLA-C-209ENST00000495835 SMIM15Q7Z3B0 74 aa15.86■□□□□ 0.13
HLA-C-209ENST00000495835 FOXA3P55318 350 aaPredicted RBP15.85■□□□□ 0.13
HLA-C-209ENST00000495835 CT83Q5H943 113 aa15.85■□□□□ 0.13
HLA-C-209ENST00000495835 TEX261Q6UWH6 196 aa15.85■□□□□ 0.13
HLA-C-209ENST00000495835 LINC00269Q8N2A0 174 aa15.85■□□□□ 0.13
HLA-C-209ENST00000495835 TMEM243Q9BU79 118 aa15.85■□□□□ 0.13
HLA-C-209ENST00000495835 GTSF1Q8WW33 167 aa15.84■□□□□ 0.13
HLA-C-209ENST00000495835 EIF5A2Q9GZV4 153 aaKnown RBP15.84■□□□□ 0.13
HLA-C-209ENST00000495835 HAMPP81172 84 aa15.83■□□□□ 0.12
HLA-C-209ENST00000495835 FAM210AQ96ND0 272 aa15.83■□□□□ 0.12
HLA-C-209ENST00000495835 TRAV8-4A0A0B4J246 113 aa15.82■□□□□ 0.12
HLA-C-209ENST00000495835 COTL1Q14019 142 aa15.82■□□□□ 0.12
HLA-C-209ENST00000495835 REG3AQ06141 175 aa15.81■□□□□ 0.12
HLA-C-209ENST00000495835 GATD1Q8NB37 220 aa15.81■□□□□ 0.12
HLA-C-209ENST00000495835 SMIM7Q9BQ49 75 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms