RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 DUX3Q96PT4 197 aa8.11□□□□□ -1.11
ZIC4-216ENST00000494569 RBMY1BA6NDE4 496 aaKnown RBP8.11□□□□□ -1.11
ZIC4-216ENST00000494569 RBMY1EA6NEQ0 496 aaKnown RBP8.11□□□□□ -1.11
ZIC4-216ENST00000494569 DUSP14O95147 198 aaKnown RBP8.11□□□□□ -1.11
ZIC4-216ENST00000494569 RBMY1DP0C7P1 496 aaKnown RBP8.11□□□□□ -1.11
ZIC4-216ENST00000494569 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
ZIC4-216ENST00000494569 C18orf15Q96N68 181 aa8.11□□□□□ -1.11
ZIC4-216ENST00000494569 HLA-DRB4P13762 266 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 TMEM61Q8N0U2 210 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 HLA-DRB4X5D2U9 266 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 G3V4G9 280 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 RBMY1A1P0DJD3 496 aaKnown RBP8.1□□□□□ -1.11
ZIC4-216ENST00000494569 RBMY1CP0DJD4 496 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 RBMY1FQ15415 496 aaKnown RBP8.1□□□□□ -1.11
ZIC4-216ENST00000494569 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
ZIC4-216ENST00000494569 PROK1P58294 105 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 JMJD8Q96S16 334 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 LINC00467Q9BRT7 94 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 H3BMM0 161 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 TMEM97Q5BJF2 176 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 OR2K2Q8NGT1 345 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
ZIC4-216ENST00000494569 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 MAP6D1Q9H9H5 199 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 M0R381 172 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 Q8N8P6 123 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 CCL24O00175 119 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 SPANXN1Q5VSR9 72 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 RASL10AQ92737 203 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
ZIC4-216ENST00000494569 TRAV12-3A0A0B4J271 114 aa8.07□□□□□ -1.12
ZIC4-216ENST00000494569 NXT2Q9NPJ8 142 aaKnown RBP8.07□□□□□ -1.12
ZIC4-216ENST00000494569 H3BUT2 72 aa8.07□□□□□ -1.12
ZIC4-216ENST00000494569 CD300EQ496F6 205 aaPredicted RBP8.07□□□□□ -1.12
ZIC4-216ENST00000494569 KIR2DL5BQ8NHK3 375 aa8.07□□□□□ -1.12
ZIC4-216ENST00000494569 SPAG8Q99932 426 aaPredicted RBP8.07□□□□□ -1.12
ZIC4-216ENST00000494569 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
ZIC4-216ENST00000494569 HHLA3Q9XRX5 114 aa8.07□□□□□ -1.12
ZIC4-216ENST00000494569 SPRY2O43597 315 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 NACAE9PAV3 2078 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 A0A087WX48 190 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 NMUP48645 174 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 FAM159AQ6UWV7 190 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 ZNF418Q8TF45 676 aaPredicted RBP8.06□□□□□ -1.12
ZIC4-216ENST00000494569 SIGMAR1Q99720 223 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 TRAV12-2A0A075B6T6 113 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 IGHV1OR15-1A0A075B7D0 117 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 KNCNA6PVL3 124 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 DEFB131AP59861 70 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 SPINK13Q1W4C9 94 aa8.06□□□□□ -1.12
ZIC4-216ENST00000494569 Q8N1Y9 231 aa8.05□□□□□ -1.12
ZIC4-216ENST00000494569 FCER1GP30273 86 aa8.05□□□□□ -1.12
ZIC4-216ENST00000494569 ODF3L2Q3SX64 289 aa8.05□□□□□ -1.12
ZIC4-216ENST00000494569 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.05□□□□□ -1.12
ZIC4-216ENST00000494569 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
ZIC4-216ENST00000494569 MDFICQ9P1T7 246 aa8.05□□□□□ -1.12
ZIC4-216ENST00000494569 PHLDA3Q9Y5J5 127 aa8.05□□□□□ -1.12
ZIC4-216ENST00000494569 SEC11AP67812 179 aa8.04□□□□□ -1.12
ZIC4-216ENST00000494569 UFSP1Q6NVU6 142 aa8.04□□□□□ -1.12
ZIC4-216ENST00000494569 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
ZIC4-216ENST00000494569 F5H768 121 aa8.04□□□□□ -1.12
ZIC4-216ENST00000494569 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
ZIC4-216ENST00000494569 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
ZIC4-216ENST00000494569 C14orf178Q8N769 122 aaPredicted RBP8.03□□□□□ -1.12
ZIC4-216ENST00000494569 K7EMI3 77 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 CD7P09564 240 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 IGKV3-20P01619 116 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 CRYGDP07320 174 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 KHDC1LQ5JSQ8 128 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 PIK3CD-AS1Q5SR53 167 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 C19orf73Q9NVV2 129 aa8.03□□□□□ -1.12
ZIC4-216ENST00000494569 C9orf118A6NHY6 69 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 HSD52Q0P140 79 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 IL17DQ8TAD2 202 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 MRAPQ8TCY5 172 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 DYNLRB2Q8TF09 96 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 JPT2Q9H910 190 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 A6NDN8 102 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 H3BRM9 83 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 AGRNO00468 2067 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 IGLV1-51P01701 117 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 BEAN1Q3B7T3 259 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
ZIC4-216ENST00000494569 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.13
ZIC4-216ENST00000494569 GTSCR1Q86UQ5 136 aa8.02□□□□□ -1.13
ZIC4-216ENST00000494569 TRBV6-5A0A0K0K1A5 114 aa8.01□□□□□ -1.13
ZIC4-216ENST00000494569 C11orf72Q8NBR9 251 aa8.01□□□□□ -1.13
ZIC4-216ENST00000494569 RPL39LQ96EH5 51 aaKnown RBP8.01□□□□□ -1.13
ZIC4-216ENST00000494569 C11orf44Q8N8P7 122 aa8.01□□□□□ -1.13
ZIC4-216ENST00000494569 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
ZIC4-216ENST00000494569 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms