RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 IGHV3-73A0A0B4J1V6 119 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 ATP5LO75964 103 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 ODF1Q14990 250 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 DKK2Q9UBU2 259 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 UQCR10Q9UDW1 63 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 VCYO14598 125 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 C9orf66Q5T8R8 295 aa11.94□□□□□ -0.5
ATG4B-225ENST00000494465 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
ATG4B-225ENST00000494465 Q6ZSN1 163 aa11.93□□□□□ -0.5
ATG4B-225ENST00000494465 PRSS1P07477 247 aa11.92□□□□□ -0.5
ATG4B-225ENST00000494465 ZFP2Q6ZN57 461 aa11.92□□□□□ -0.5
ATG4B-225ENST00000494465 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
ATG4B-225ENST00000494465 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
ATG4B-225ENST00000494465 ZMAT4Q9H898 229 aa11.92□□□□□ -0.5
ATG4B-225ENST00000494465 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
ATG4B-225ENST00000494465 CYSRT1A8MQ03 144 aa11.92□□□□□ -0.5
ATG4B-225ENST00000494465 HSBP1L1C9JCN9 74 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 RS1O15537 224 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 P0DMU3 169 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 FAM231AP0DMU4 169 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 FAM231CP0DMU5 169 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 C1QTNF4Q9BXJ3 329 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 Q9UF83 564 aa11.91□□□□□ -0.5
ATG4B-225ENST00000494465 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
ATG4B-225ENST00000494465 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.9□□□□□ -0.5
ATG4B-225ENST00000494465 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
ATG4B-225ENST00000494465 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
ATG4B-225ENST00000494465 H7C1H1 209 aa11.9□□□□□ -0.51
ATG4B-225ENST00000494465 EREGO14944 169 aa11.9□□□□□ -0.51
ATG4B-225ENST00000494465 Q6ZN92 141 aa11.9□□□□□ -0.51
ATG4B-225ENST00000494465 SNHG12Q9BXW3 62 aa11.9□□□□□ -0.51
ATG4B-225ENST00000494465 RHODO00212 210 aa11.89□□□□□ -0.51
ATG4B-225ENST00000494465 RIPPLY3P57055 190 aa11.89□□□□□ -0.51
ATG4B-225ENST00000494465 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
ATG4B-225ENST00000494465 GTSCR1Q86UQ5 136 aa11.89□□□□□ -0.51
ATG4B-225ENST00000494465 TSHBP01222 138 aa11.89□□□□□ -0.51
ATG4B-225ENST00000494465 STPG4Q8N801 248 aa11.89□□□□□ -0.51
ATG4B-225ENST00000494465 TRGV1A0A0A0MS02 117 aa11.88□□□□□ -0.51
ATG4B-225ENST00000494465 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
ATG4B-225ENST00000494465 ERASQ7Z444 233 aa11.88□□□□□ -0.51
ATG4B-225ENST00000494465 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
ATG4B-225ENST00000494465 A0A087WX48 190 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 Q6ZTI0 123 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 HHLA3Q9XRX5 114 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 CYSLTR1Q9Y271 337 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 TP53TG1Q9Y2A0 90 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
ATG4B-225ENST00000494465 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
ATG4B-225ENST00000494465 KRTAP24-1Q3LI83 254 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
ATG4B-225ENST00000494465 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
ATG4B-225ENST00000494465 TMEM238LA0A1B0GVL6 79 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 IGIPA6NJ69 53 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 I3L3M4 83 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
ATG4B-225ENST00000494465 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 C16orf74Q96GX8 76 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 G0S2P27469 103 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 RHOHQ15669 191 aa11.86□□□□□ -0.51
ATG4B-225ENST00000494465 NOP10Q9NPE3 64 aaKnown RBP11.86□□□□□ -0.51
ATG4B-225ENST00000494465 IGKCP01834 107 aa11.85□□□□□ -0.51
ATG4B-225ENST00000494465 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
ATG4B-225ENST00000494465 M0R143 59 aa11.85□□□□□ -0.51
ATG4B-225ENST00000494465 DPM2O94777 84 aa11.85□□□□□ -0.51
ATG4B-225ENST00000494465 LINC01549A6NIU2 74 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 COX8AP10176 69 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 SLC25A34Q6PIV7 304 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 ZNF479Q96JC4 524 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 MRPS16Q9Y3D3 137 aaKnown RBP11.84□□□□□ -0.51
ATG4B-225ENST00000494465 FBN1P35555 2871 aaKnown RBP11.84□□□□□ -0.51
ATG4B-225ENST00000494465 WIPF1O43516 503 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
ATG4B-225ENST00000494465 OVOL2Q9BRP0 275 aa11.83□□□□□ -0.52
ATG4B-225ENST00000494465 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
ATG4B-225ENST00000494465 F8VRH5 84 aa11.83□□□□□ -0.52
ATG4B-225ENST00000494465 FGF6P10767 208 aa11.83□□□□□ -0.52
ATG4B-225ENST00000494465 LBHQ53QV2 105 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-225ENST00000494465 C20orf203Q8NBC4 194 aa11.83□□□□□ -0.52
ATG4B-225ENST00000494465 TRAV4A0A0B4J268 109 aa11.82□□□□□ -0.52
ATG4B-225ENST00000494465 TCTAP57738 103 aa11.82□□□□□ -0.52
ATG4B-225ENST00000494465 TIMM17AQ99595 171 aa11.82□□□□□ -0.52
ATG4B-225ENST00000494465 PRSS29PA6NIE9 313 aa11.82□□□□□ -0.52
ATG4B-225ENST00000494465 DNAJC30Q96LL9 226 aa11.82□□□□□ -0.52
ATG4B-225ENST00000494465 TMEM141Q96I45 108 aa11.81□□□□□ -0.52
ATG4B-225ENST00000494465 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
ATG4B-225ENST00000494465 PLNP26678 52 aa11.81□□□□□ -0.52
ATG4B-225ENST00000494465 IGKV2D-26A0A0A0MRZ7 120 aa11.8□□□□□ -0.52
ATG4B-225ENST00000494465 ZC2HC1BQ5TFG8 222 aa11.8□□□□□ -0.52
ATG4B-225ENST00000494465 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
ATG4B-225ENST00000494465 GAGE7O76087 117 aa11.79□□□□□ -0.52
ATG4B-225ENST00000494465 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
ATG4B-225ENST00000494465 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
ATG4B-225ENST00000494465 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
ATG4B-225ENST00000494465 C2orf91Q6ZV80 131 aa11.78□□□□□ -0.52
ATG4B-225ENST00000494465 BOD1L2Q8IYS8 172 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms