RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
SYP-208ENST00000494396 CR1P17927 2039 aa12.46□□□□□ -0.41
SYP-208ENST00000494396 IGHV3OR16-8A0A075B7F1 116 aa12.46□□□□□ -0.41
SYP-208ENST00000494396 VCYO14598 125 aa12.46□□□□□ -0.41
SYP-208ENST00000494396 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.42
SYP-208ENST00000494396 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.42
SYP-208ENST00000494396 J3QQQ9 107 aa12.46□□□□□ -0.42
SYP-208ENST00000494396 DUSP14O95147 198 aaKnown RBP12.46□□□□□ -0.42
SYP-208ENST00000494396 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.42
SYP-208ENST00000494396 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.42
SYP-208ENST00000494396 MRPL23Q16540 153 aaKnown RBP12.46□□□□□ -0.42
SYP-208ENST00000494396 DEFB112Q30KQ8 113 aa12.46□□□□□ -0.42
SYP-208ENST00000494396 ZNF876PQ49A33 203 aa12.46□□□□□ -0.42
SYP-208ENST00000494396 C19orf54Q5BKX5 351 aa12.46□□□□□ -0.42
SYP-208ENST00000494396 GCN1Q92616 2671 aaKnown RBP12.45□□□□□ -0.42
SYP-208ENST00000494396 MGPP08493 103 aa12.45□□□□□ -0.42
SYP-208ENST00000494396 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
SYP-208ENST00000494396 POLR2KP53803 58 aaKnown RBP12.45□□□□□ -0.42
SYP-208ENST00000494396 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
SYP-208ENST00000494396 A0A0J9YX75 114 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 TSHBP01222 138 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 FSHBP01225 129 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 IGHV3-33P01772 117 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 ATXN8Q156A1 80 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 PRR9Q5T870 116 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 IGF1P05019 195 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 AMELXQ99217 191 aa12.44□□□□□ -0.42
SYP-208ENST00000494396 UNC79Q9P2D8 2635 aa12.43□□□□□ -0.42
SYP-208ENST00000494396 C9JAW5 83 aa12.43□□□□□ -0.42
SYP-208ENST00000494396 LEPROTO15243 131 aa12.43□□□□□ -0.42
SYP-208ENST00000494396 IGHG2P01859 326 aa12.43□□□□□ -0.42
SYP-208ENST00000494396 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
SYP-208ENST00000494396 NDUFV3P56181 108 aaKnown RBP12.43□□□□□ -0.42
SYP-208ENST00000494396 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
SYP-208ENST00000494396 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
SYP-208ENST00000494396 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 GAGE7O76087 117 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 GAGE4Q13068 117 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 TMEM170BQ5T4T1 132 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 WFDC11Q8NEX6 87 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 IGHV3-66A0A0C4DH42 116 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 TRBV6-5A0A0K0K1A5 114 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 IGHV4-59P01825 116 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
SYP-208ENST00000494396 TMEM263Q8WUH6 116 aaKnown RBP12.42□□□□□ -0.42
SYP-208ENST00000494396 TEX15Q9BXT5 2789 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 NBPF19A0A087WUL8 3843 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 TRBV27A0A0K0K1C4 114 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
SYP-208ENST00000494396 IFITM1P13164 125 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 BLCAPP62952 87 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 TTC32Q5I0X7 151 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 Q6ZS46 218 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 TRBV30A0A0K0K1B3 111 aa12.41□□□□□ -0.42
SYP-208ENST00000494396 A4D1N5 150 aa12.4□□□□□ -0.42
SYP-208ENST00000494396 RNASE3P12724 160 aaKnown RBP12.4□□□□□ -0.42
SYP-208ENST00000494396 LINC00315P59091 139 aa12.4□□□□□ -0.42
SYP-208ENST00000494396 RHOHQ15669 191 aa12.4□□□□□ -0.42
SYP-208ENST00000494396 ITPR2Q14571 2701 aa12.4□□□□□ -0.42
SYP-208ENST00000494396 ARL3P36405 182 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 TSPEAR-AS2P59090 65 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 LINC01620Q4KN68 170 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 Q6ZQT7 251 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 TRBV10-2A0A0K0K1G8 114 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 Q8N1Y9 231 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 SS18L2Q9UHA2 77 aa12.39□□□□□ -0.43
SYP-208ENST00000494396 PDZD2O15018 2839 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 IGHV3OR16-13A0A075B7E8 117 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 IGHV3-74A0A0B4J1X5 117 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 FAM240AA0A1B0GVK7 77 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 TMEM223A0PJW6 202 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 B5MCH6 92 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 H3BUA1 57 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 M0R2P5 195 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 SOCS3O14543 225 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 BRI3O95415 125 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 NSUN5P1Q3KNT7 163 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 Q6YL49 198 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 RAX2Q96IS3 184 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
SYP-208ENST00000494396 TRAV8-4A0A0B4J246 113 aa12.37□□□□□ -0.43
SYP-208ENST00000494396 LGALS9O00182 355 aa12.37□□□□□ -0.43
SYP-208ENST00000494396 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
SYP-208ENST00000494396 MXRA5Q9NR99 2828 aa12.37□□□□□ -0.43
SYP-208ENST00000494396 NDUFA4O00483 81 aa12.36□□□□□ -0.43
SYP-208ENST00000494396 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
SYP-208ENST00000494396 ZNF580Q9UK33 172 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms