RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
COL1A1-208ENST00000494334 COMMD7Q86VX2 200 aa9.22□□□□□ -0.93
COL1A1-208ENST00000494334 IGHV3-38A0A0C4DH36 116 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 LINC00862A6NCI5 91 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 H7C1H1 209 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 DNAH10OSP0CZ25 163 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 ADCYAP1P18509 176 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 SMIM15Q7Z3B0 74 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 DNAH17Q9UFH2 4485 aa9.21□□□□□ -0.94
COL1A1-208ENST00000494334 FAT2Q9NYQ8 4349 aa9.2□□□□□ -0.94
COL1A1-208ENST00000494334 A0A087WWC5 75 aa9.2□□□□□ -0.94
COL1A1-208ENST00000494334 RASL11AQ6T310 242 aa9.2□□□□□ -0.94
COL1A1-208ENST00000494334 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
COL1A1-208ENST00000494334 DNAJC30Q96LL9 226 aa9.2□□□□□ -0.94
COL1A1-208ENST00000494334 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 F8W036 122 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 PPP1R2P9O14990 202 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 RIGQ13278 110 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 GATD1Q8NB37 220 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 TMEM191AQ9H0A3 160 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 NIT2Q9NQR4 276 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
COL1A1-208ENST00000494334 TRAV9-2A0A087WT02 112 aa9.18□□□□□ -0.94
COL1A1-208ENST00000494334 LINC01556Q5JQF7 62 aa9.18□□□□□ -0.94
COL1A1-208ENST00000494334 LINC00336Q6ZUF6 198 aa9.18□□□□□ -0.94
COL1A1-208ENST00000494334 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
COL1A1-208ENST00000494334 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
COL1A1-208ENST00000494334 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
COL1A1-208ENST00000494334 FRAS1Q86XX4 4008 aa9.18□□□□□ -0.94
COL1A1-208ENST00000494334 TRBV6-8A0A0A6YYG3 113 aa9.17□□□□□ -0.94
COL1A1-208ENST00000494334 K7EP13 123 aa9.17□□□□□ -0.94
COL1A1-208ENST00000494334 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
COL1A1-208ENST00000494334 BTF3P20290 206 aaKnown RBP9.17□□□□□ -0.94
COL1A1-208ENST00000494334 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.17□□□□□ -0.94
COL1A1-208ENST00000494334 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
COL1A1-208ENST00000494334 SEC11CQ9BY50 192 aa9.17□□□□□ -0.94
COL1A1-208ENST00000494334 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 IGHV3-30P01768 117 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 IGHV3-33P01772 117 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 IGHV3-30-5P0DP03 117 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 RAB4AP20338 218 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 Q8N3U1 123 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 FRZBQ92765 325 aa9.16□□□□□ -0.94
COL1A1-208ENST00000494334 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
COL1A1-208ENST00000494334 GAS8-AS1O95177 125 aa9.15□□□□□ -0.94
COL1A1-208ENST00000494334 CAMPP49913 170 aa9.15□□□□□ -0.94
COL1A1-208ENST00000494334 MRPL54Q6P161 138 aaKnown RBP9.15□□□□□ -0.94
COL1A1-208ENST00000494334 NIT1Q86X76 327 aa9.15□□□□□ -0.94
COL1A1-208ENST00000494334 A0A1B0GW15 77 aa9.14□□□□□ -0.95
COL1A1-208ENST00000494334 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
COL1A1-208ENST00000494334 TMEM97Q5BJF2 176 aa9.14□□□□□ -0.95
COL1A1-208ENST00000494334 C10orf91Q5T1B1 145 aa9.14□□□□□ -0.95
COL1A1-208ENST00000494334 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
COL1A1-208ENST00000494334 TNP2Q05952 138 aa9.13□□□□□ -0.95
COL1A1-208ENST00000494334 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
COL1A1-208ENST00000494334 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
COL1A1-208ENST00000494334 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
COL1A1-208ENST00000494334 HBBP68871 147 aa9.12□□□□□ -0.95
COL1A1-208ENST00000494334 KCNIP4Q6PIL6 250 aa9.12□□□□□ -0.95
COL1A1-208ENST00000494334 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
COL1A1-208ENST00000494334 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
COL1A1-208ENST00000494334 MRAP2Q96G30 205 aa9.12□□□□□ -0.95
COL1A1-208ENST00000494334 TRBV25-1A0A075B6N4 114 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 TMEM262E9PQX1 116 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 SMKR1H3BMG3 65 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 S100A8P05109 93 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 RPS10P46783 165 aaKnown RBP9.11□□□□□ -0.95
COL1A1-208ENST00000494334 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
COL1A1-208ENST00000494334 ATP5L2Q7Z4Y8 100 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 NFE4Q86UQ8 179 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 CHCHD5Q9BSY4 110 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 CHCHD7Q9BUK0 85 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 CARHSP1Q9Y2V2 147 aaKnown RBP9.11□□□□□ -0.95
COL1A1-208ENST00000494334 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
COL1A1-208ENST00000494334 A0A087WX48 190 aa9.1□□□□□ -0.95
COL1A1-208ENST00000494334 IGHV1-24A0A0C4DH33 117 aa9.1□□□□□ -0.95
COL1A1-208ENST00000494334 NCR2O95944 276 aa9.1□□□□□ -0.95
COL1A1-208ENST00000494334 COTL1Q14019 142 aa9.1□□□□□ -0.95
COL1A1-208ENST00000494334 POLR2KP53803 58 aaKnown RBP9.09□□□□□ -0.95
COL1A1-208ENST00000494334 GAGE6Q13070 117 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 LAGE3Q14657 143 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 MPV17L2Q567V2 206 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 ATRAIDQ6UW56 229 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 NRACQ8N912 160 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 IMMP2LQ96T52 175 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 ST20Q9HBF5 79 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 DNAH11Q96DT5 4516 aa9.09□□□□□ -0.95
COL1A1-208ENST00000494334 C7orf77A4D0Y5 90 aa9.08□□□□□ -0.96
COL1A1-208ENST00000494334 CLRN3Q8NCR9 226 aa9.08□□□□□ -0.96
COL1A1-208ENST00000494334 BTF3L4Q96K17 158 aa9.08□□□□□ -0.96
COL1A1-208ENST00000494334 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
COL1A1-208ENST00000494334 TMEM70Q9BUB7 260 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms