RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 COPS9Q8WXC6 57 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 CLEC2BQ92478 149 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 CST11Q9H112 138 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 NXT2Q9NPJ8 142 aaKnown RBP0.91□□□□□ -2.26
LMNB1-207ENST00000494185 KLK9Q9UKQ9 250 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 HEATR5BQ9P2D3 2071 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 ADGRB2O60241 1585 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 MICAL3Q7RTP6 2002 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 BAZ1AQ9NRL2 1556 aaPredicted RBP0.91□□□□□ -2.26
LMNB1-207ENST00000494185 KIF1AQ12756 1690 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 CUL7Q14999 1698 aa0.91□□□□□ -2.26
LMNB1-207ENST00000494185 MYO5AQ9Y4I1 1855 aaKnown RBP0.9□□□□□ -2.26
LMNB1-207ENST00000494185 MCM3APO60318 1980 aa0.9□□□□□ -2.26
LMNB1-207ENST00000494185 BLMP54132 1417 aaPredicted RBP0.9□□□□□ -2.26
LMNB1-207ENST00000494185 NINQ8N4C6 2090 aa0.9□□□□□ -2.26
LMNB1-207ENST00000494185 ARHGAP5Q13017 1502 aa0.9□□□□□ -2.26
LMNB1-207ENST00000494185 CLASP1Q7Z460 1538 aa0.9□□□□□ -2.26
LMNB1-207ENST00000494185 DOCK10Q96BY6 2186 aa0.9□□□□□ -2.26
LMNB1-207ENST00000494185 KIF13AQ9H1H9 1805 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 MYH6P13533 1939 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 UMAD1C9J7I0 102 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 ATOX1O00244 68 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 INE1O15225 51 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 C3orf79P0CE67 100 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 SMIM13P0DJ93 91 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 CKS2P33552 79 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 UBE2G1P62253 170 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 RHOHQ15669 191 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 PMCHL1Q16048 86 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 DEFB121Q5J5C9 76 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 S100A7L2Q5SY68 101 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 COMMD6Q7Z4G1 85 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 FAM223AQ8IWN6 122 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 Q8TAT8 98 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 TRGV9Q99603 122 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 ORMDL1Q9P0S3 153 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 NDUFA12Q9UI09 145 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 SNURFQ9Y675 71 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 OTOGLQ3ZCN5 2332 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 GOLGA3Q08378 1498 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 ZFC3H1O60293 1989 aaKnown RBP0.9□□□□□ -2.27
LMNB1-207ENST00000494185 RP1P56715 2156 aa0.9□□□□□ -2.27
LMNB1-207ENST00000494185 EPRSP07814 1512 aaKnown RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 TOP2AP11388 1531 aaKnown RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 CUX1P39880 1505 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 UGGT2Q9NYU1 1516 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 ARAP2Q8WZ64 1704 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 ANKRD26Q9UPS8 1709 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 ANAPC1Q9H1A4 1944 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 ZFHX3Q15911 3703 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 GBF1Q92538 1859 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 KIF21AQ7Z4S6 1674 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 NRKQ7Z2Y5 1582 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 DIP2BQ9P265 1576 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 IGHV1-24A0A0C4DH33 117 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 IGKV3D-7A0A0C4DH55 119 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 IGKV3OR2-268A0A0C4DH90 116 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 LOC107984156A0A0G2JMH3 177 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 TRBV6-4A0A1B0GX49 114 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 IGKV2-29A2NJV5 120 aaPredicted RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 HCG22E2RYF7 251 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 C5orf67F2Z3F1 127 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 HCRTO43612 131 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 IGHV3-33P01772 117 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 RPL7L1Q6DKI1 246 aaKnown RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 ARL17AQ8IVW1 177 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 SPTSSAQ969W0 71 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 TMEM141Q96I45 108 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 PROK2Q9HC23 129 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 MANBALQ9NQG1 85 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 MRPL35Q9NZE8 188 aaKnown RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 ABCC3O15438 1527 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 DUOX2Q9NRD8 1548 aa0.89□□□□□ -2.27
LMNB1-207ENST00000494185 EDC4Q6P2E9 1401 aaKnown RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 BAZ2BQ9UIF8 2168 aaKnown RBP0.89□□□□□ -2.27
LMNB1-207ENST00000494185 PCDH15Q96QU1 1955 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 KIAA1549Q9HCM3 1950 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 ZC3H13Q5T200 1668 aaKnown RBP0.88□□□□□ -2.27
LMNB1-207ENST00000494185 ROBO1Q9Y6N7 1651 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 DIP2CQ9Y2E4 1556 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 SHANK2Q9UPX8 1470 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 PARP14Q460N5 1801 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 TRBV7-1A0A0A6YYK4 115 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 TRAV13-2A0A0B4J235 113 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 TRAV22A0A0B4J277 110 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 KANTRA0A1W2PQU2 76 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 FAM223BA6NKX1 122 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 SNRPGP15A8MWD9 76 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 F2Z2F3 143 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 J3QLW9 94 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 TFF1P04155 84 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 COX8AP10176 69 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 ATP5EP56381 51 aaPredicted RBP0.88□□□□□ -2.27
LMNB1-207ENST00000494185 KRTDAPP60985 99 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 SNRPFP62306 86 aaKnown RBP0.88□□□□□ -2.27
LMNB1-207ENST00000494185 MIR22HGQ0VDD5 57 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 ZNF56Q15929 161 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 C9orf116Q5BN46 136 aaPredicted RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms