RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 OR10J3Q5JRS4 329 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
MCF2L-231ENST00000494043 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
MCF2L-231ENST00000494043 TRBV10-1A0A0K0K1A3 114 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 HTN3P15516 51 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 RHOHQ15669 191 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 C18orf32Q8TCD1 76 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 NIT2Q9NQR4 276 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 PRO0255Q9UI72 69 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 HHLA3Q9XRX5 114 aa8.02□□□□□ -1.13
MCF2L-231ENST00000494043 TRBV6-5A0A0K0K1A5 114 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 F5H768 121 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 CRYBA4P53673 196 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 IQCJQ1A5X6 159 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 NEXN-AS1Q8NBZ9 246 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 DNAJC30Q96LL9 226 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 C20orf78Q9BR46 151 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 PRADC1Q9BSG0 188 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 ST20Q9HBF5 79 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 Q9UF83 564 aa8.01□□□□□ -1.13
MCF2L-231ENST00000494043 PRSS47A8MTI9 375 aa8□□□□□ -1.13
MCF2L-231ENST00000494043 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
MCF2L-231ENST00000494043 Q0VG73 95 aa8□□□□□ -1.13
MCF2L-231ENST00000494043 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
MCF2L-231ENST00000494043 TRAV26-1A0A087WT03 109 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 DEFB131BA0A096LNP1 70 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 TRAV10A0A0B4J240 114 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 LOC100131303A0A0U1RQF7 123 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 SDHAF1A6NFY7 115 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 PAX4O43316 350 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
MCF2L-231ENST00000494043 RPL36AP83881 106 aaKnown RBP7.99□□□□□ -1.13
MCF2L-231ENST00000494043 RPL36ALQ969Q0 106 aaKnown RBP7.99□□□□□ -1.13
MCF2L-231ENST00000494043 VSIG2Q96IQ7 327 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 TMEM70Q9BUB7 260 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 SMIM2Q9BVW6 85 aa7.99□□□□□ -1.13
MCF2L-231ENST00000494043 TRBV7-3A0A075B6L6 115 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 A0A0J9YY99 117 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 LOC389332A0A1B0GUA5 103 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 GAGE12JA6NER3 117 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 LINC00694P0DN24 101 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 GYPEP15421 78 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 PMCHP20382 165 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
MCF2L-231ENST00000494043 GAGE1Q13065 139 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 GAGE4Q13068 117 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 GAGE5Q13069 117 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 ZNRF2Q8NHG8 242 aa7.98□□□□□ -1.13
MCF2L-231ENST00000494043 TMA7Q9Y2S6 64 aaKnown RBP7.98□□□□□ -1.13
MCF2L-231ENST00000494043 IGLV2-18A0A075B6J9 118 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 TRBV27A0A0K0K1C4 114 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 IFI27P40305 119 aaPredicted RBP7.97□□□□□ -1.13
MCF2L-231ENST00000494043 UBE2D3P61077 147 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 UBE2D2P62837 147 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 NEGR1Q7Z3B1 354 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 Q8N8P6 123 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 PRSS3P2Q8NHM4 247 aa7.97□□□□□ -1.13
MCF2L-231ENST00000494043 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
MCF2L-231ENST00000494043 H3BNG1 76 aa7.96□□□□□ -1.14
MCF2L-231ENST00000494043 VCYO14598 125 aa7.96□□□□□ -1.14
MCF2L-231ENST00000494043 COA6Q5JTJ3 125 aaKnown RBP7.96□□□□□ -1.14
MCF2L-231ENST00000494043 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
MCF2L-231ENST00000494043 NIT1Q86X76 327 aa7.96□□□□□ -1.14
MCF2L-231ENST00000494043 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
MCF2L-231ENST00000494043 I3L3M4 83 aa7.95□□□□□ -1.14
MCF2L-231ENST00000494043 SERF1AO75920 110 aa7.95□□□□□ -1.14
MCF2L-231ENST00000494043 LINC00614P0C842 121 aa7.95□□□□□ -1.14
MCF2L-231ENST00000494043 NDUFA6P56556 154 aa7.95□□□□□ -1.14
MCF2L-231ENST00000494043 LINC00310P59036 64 aa7.95□□□□□ -1.14
MCF2L-231ENST00000494043 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
MCF2L-231ENST00000494043 DAZ4Q86SG3 579 aaKnown RBP7.95□□□□□ -1.14
MCF2L-231ENST00000494043 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
MCF2L-231ENST00000494043 DAZ3Q9NR90 486 aaKnown RBP7.95□□□□□ -1.14
MCF2L-231ENST00000494043 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
MCF2L-231ENST00000494043 IGHV3-38A0A0C4DH36 116 aa7.94□□□□□ -1.14
MCF2L-231ENST00000494043 LINC01546A6NGU7 62 aa7.94□□□□□ -1.14
MCF2L-231ENST00000494043 TSHBP01222 138 aa7.94□□□□□ -1.14
MCF2L-231ENST00000494043 S100A6P06703 90 aa7.94□□□□□ -1.14
MCF2L-231ENST00000494043 MRPL23Q16540 153 aaKnown RBP7.94□□□□□ -1.14
MCF2L-231ENST00000494043 CHCHD1Q96BP2 118 aaKnown RBP7.94□□□□□ -1.14
MCF2L-231ENST00000494043 KIR2DL4Q99706 377 aa7.94□□□□□ -1.14
MCF2L-231ENST00000494043 TGP01266 2768 aa7.94□□□□□ -1.14
MCF2L-231ENST00000494043 A0A096LPF7 62 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 K7EMI3 77 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 TCAPO15273 167 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 SH2D6Q7Z4S9 175 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 DNAH7Q8WXX0 4024 aa7.93□□□□□ -1.14
MCF2L-231ENST00000494043 DYNC2H1Q8NCM8 4307 aaKnown RBP7.92□□□□□ -1.14
MCF2L-231ENST00000494043 NUPR1O60356 82 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 812.1 ms