RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 INSP01308 110 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.27
NPHP3-209ENST00000493732 DEFB136Q30KP8 78 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 C12orf74Q32Q52 190 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 MORN3Q6PF18 240 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-209ENST00000493732 KRTAP1-3Q8IUG1 177 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 PHLDA1Q8WV24 401 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-209ENST00000493732 DLX4Q92988 240 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-209ENST00000493732 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 PYGO1Q9Y3Y4 419 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 CD300EQ496F6 205 aaPredicted RBP7.09□□□□□ -1.27
NPHP3-209ENST00000493732 Q6ZSV7 163 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 DNAJC30Q96LL9 226 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 SRSF9Q13242 221 aaKnown RBP eCLIP7.08□□□□□ -1.28
NPHP3-209ENST00000493732 TMEM170BQ5T4T1 132 aa7.08□□□□□ -1.28
NPHP3-209ENST00000493732 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
NPHP3-209ENST00000493732 ZNF479Q96JC4 524 aa7.08□□□□□ -1.28
NPHP3-209ENST00000493732 VCX2Q9H322 139 aa7.08□□□□□ -1.28
NPHP3-209ENST00000493732 UBR5O95071 2799 aaPredicted RBP7.08□□□□□ -1.28
NPHP3-209ENST00000493732 USP24Q9UPU5 2620 aa7.08□□□□□ -1.28
NPHP3-209ENST00000493732 IGLL5B9A064 214 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 RBX1P62877 108 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 LINC01587Q99440 93 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
NPHP3-209ENST00000493732 NAV2Q8IVL1 2488 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 CREBBPQ92793 2442 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 DNAJC9-AS1A6NH13 148 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 RBMY1A1P0DJD3 496 aaKnown RBP7.07□□□□□ -1.28
NPHP3-209ENST00000493732 RBMY1CP0DJD4 496 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 HTN1P15515 57 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 LGALS3P17931 250 aaKnown RBP7.07□□□□□ -1.28
NPHP3-209ENST00000493732 RBMY1FQ15415 496 aaKnown RBP7.07□□□□□ -1.28
NPHP3-209ENST00000493732 LRRK2Q5S007 2527 aa7.07□□□□□ -1.28
NPHP3-209ENST00000493732 P0DMU3 169 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 FAM231AP0DMU4 169 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 FAM231CP0DMU5 169 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 FHL3Q13643 280 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 RRN3P1Q2M238 152 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 BEAN1Q3B7T3 259 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 LYRM7Q5U5X0 104 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 PLEKHB2Q96CS7 222 aa7.06□□□□□ -1.28
NPHP3-209ENST00000493732 RBMY1BA6NDE4 496 aaKnown RBP7.05□□□□□ -1.28
NPHP3-209ENST00000493732 RBMY1EA6NEQ0 496 aaKnown RBP7.05□□□□□ -1.28
NPHP3-209ENST00000493732 F8W1H4 67 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 J3QQQ9 107 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 LEPROTO15243 131 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 RBMY1DP0C7P1 496 aaKnown RBP7.05□□□□□ -1.28
NPHP3-209ENST00000493732 STHQ8IWL8 128 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 NAA38Q9BRA0 125 aaKnown RBP7.05□□□□□ -1.28
NPHP3-209ENST00000493732 SPANXA1Q9NS26 97 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 CELSR1Q9NYQ6 3014 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 K7ERJ3 54 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 CCL24O00175 119 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 IGHV3-53P01767 116 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 CFAP126Q5VTH2 177 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 SLC25A29Q8N8R3 303 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 ZNRF2Q8NHG8 242 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 C16orf95Q9H693 158 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 TSSC4Q9Y5U2 329 aaPredicted RBP7.05□□□□□ -1.28
NPHP3-209ENST00000493732 PTPN13Q12923 2485 aa7.05□□□□□ -1.28
NPHP3-209ENST00000493732 DOPEY2Q9Y3R5 2298 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 IGLV4-3A0A075B6K6 122 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 A0A0J9YY99 117 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 TMEM223A0PJW6 202 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 RS1O15537 224 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 C11orf72Q8NBR9 251 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 WFDC11Q8NEX6 87 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 VPS25Q9BRG1 176 aa7.04□□□□□ -1.28
NPHP3-209ENST00000493732 CD28P10747 220 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 UBE2D1P51668 147 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 AMELXQ99217 191 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 AGRNO00468 2067 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 UTP20O75691 2785 aaKnown RBP7.03□□□□□ -1.28
NPHP3-209ENST00000493732 RNASE1P07998 156 aaKnown RBP7.03□□□□□ -1.28
NPHP3-209ENST00000493732 EMP1P54849 157 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 SMAGPQ0VAQ4 97 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 RNF151Q2KHN1 245 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
NPHP3-209ENST00000493732 J3QR89 54 aa7.02□□□□□ -1.29
NPHP3-209ENST00000493732 ZNF22P17026 224 aaPredicted RBP7.02□□□□□ -1.29
NPHP3-209ENST00000493732 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
NPHP3-209ENST00000493732 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.29
NPHP3-209ENST00000493732 MRPL16Q9NX20 251 aaKnown RBP7.02□□□□□ -1.29
NPHP3-209ENST00000493732 POLQO75417 2590 aa7.02□□□□□ -1.29
NPHP3-209ENST00000493732 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
NPHP3-209ENST00000493732 FBN2P35556 2912 aa7.02□□□□□ -1.29
NPHP3-209ENST00000493732 IGHV3-73A0A0B4J1V6 119 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 TMEM238C9JI98 176 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 TIMM21Q9BVV7 248 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 MAP1AP78559 2803 aaPredicted RBP7.01□□□□□ -1.29
NPHP3-209ENST00000493732 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 CRYBG3Q68DQ2 2970 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 TRBV10-1A0A0K0K1A3 114 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 G3V4G9 280 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 ZNF418Q8TF45 676 aaPredicted RBP7.01□□□□□ -1.29
NPHP3-209ENST00000493732 DEFB104AQ8WTQ1 72 aa7.01□□□□□ -1.29
NPHP3-209ENST00000493732 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms