RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 IGLL1P15814 213 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 PLNP26678 52 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 PTTG1IPP53801 180 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 RHOHQ15669 191 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 ODF3L2Q3SX64 289 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 PAPPA-AS1Q5QFB9 102 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 LINC00173Q6ZV60 143 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 C11orf44Q8N8P7 122 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 TOMM6Q96B49 74 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 TMEM208Q9BTX3 173 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 MDFICQ9P1T7 246 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 CYSLTR1Q9Y271 337 aa7.34□□□□□ -1.23
PRPF3-206ENST00000493553 TRAV26-2A0A0B4J265 109 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 CRLF1O75462 422 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 DPM2O94777 84 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
PRPF3-206ENST00000493553 POLR2KP53803 58 aaKnown RBP7.33□□□□□ -1.24
PRPF3-206ENST00000493553 ZNF56Q15929 161 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 BEAN1Q3B7T3 259 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 SUMO4Q6EEV6 95 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 ZFP2Q6ZN57 461 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 ERASQ7Z444 233 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 TMEM141Q96I45 108 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 DNAJC30Q96LL9 226 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 SCGB3A1Q96QR1 104 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 MCRIP2Q9BUT9 160 aaKnown RBP7.33□□□□□ -1.24
PRPF3-206ENST00000493553 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 SELENOKQ9Y6D0 94 aa7.33□□□□□ -1.24
PRPF3-206ENST00000493553 H0Y8G0 127 aa7.32□□□□□ -1.24
PRPF3-206ENST00000493553 DLEU1O43261 78 aa7.32□□□□□ -1.24
PRPF3-206ENST00000493553 CRYGDP07320 174 aa7.32□□□□□ -1.24
PRPF3-206ENST00000493553 NPSP0C0P6 89 aa7.32□□□□□ -1.24
PRPF3-206ENST00000493553 ATOH7Q8N100 152 aa7.32□□□□□ -1.24
PRPF3-206ENST00000493553 WNK1Q9H4A3 2382 aa7.32□□□□□ -1.24
PRPF3-206ENST00000493553 SDHAF1A6NFY7 115 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 M0QY20 66 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 SIVA1O15304 175 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 COX8AP10176 69 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 ODF1Q14990 250 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 NSUN5P1Q3KNT7 163 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 C9orf66Q5T8R8 295 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 C12orf54Q6X4T0 127 aa7.31□□□□□ -1.24
PRPF3-206ENST00000493553 A0A087WWL8 130 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 A0A087WX48 190 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 RBMY1BA6NDE4 496 aaKnown RBP7.3□□□□□ -1.24
PRPF3-206ENST00000493553 RBMY1EA6NEQ0 496 aaKnown RBP7.3□□□□□ -1.24
PRPF3-206ENST00000493553 INAFM1C9JVW0 142 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 GAS8-AS1O95177 125 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 IGKCP01834 107 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 RBMY1DP0C7P1 496 aaKnown RBP7.3□□□□□ -1.24
PRPF3-206ENST00000493553 RIPPLY3P57055 190 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 COL5A1-AS1Q5SY13 56 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 GTSCR1Q86UQ5 136 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 LURAP1LQ8IV03 231 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 RPL39LQ96EH5 51 aaKnown RBP7.3□□□□□ -1.24
PRPF3-206ENST00000493553 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
PRPF3-206ENST00000493553 C2CD3Q4AC94 2353 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 I3L3M4 83 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 CRYBA4P53673 196 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 FXYD7P58549 80 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 TMEM263Q8WUH6 116 aaKnown RBP7.29□□□□□ -1.24
PRPF3-206ENST00000493553 C18orf15Q96N68 181 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 SMR3AQ99954 134 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 XCL2Q9UBD3 114 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 TNFRSF18Q9Y5U5 241 aa7.29□□□□□ -1.24
PRPF3-206ENST00000493553 F8VRH5 84 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 RS1O15537 224 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 IGHV3-53P01767 116 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 HTN1P15515 57 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 DAZ2Q13117 558 aaKnown RBP7.28□□□□□ -1.24
PRPF3-206ENST00000493553 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 C16orf74Q96GX8 76 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 SNHG12Q9BXW3 62 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 DKK2Q9UBU2 259 aa7.28□□□□□ -1.24
PRPF3-206ENST00000493553 CELSR1Q9NYQ6 3014 aa7.27□□□□□ -1.25
PRPF3-206ENST00000493553 TRBV10-1A0A0K0K1A3 114 aa7.27□□□□□ -1.25
PRPF3-206ENST00000493553 hDV102S1A0JD36 115 aa7.27□□□□□ -1.25
PRPF3-206ENST00000493553 RBMY1A1P0DJD3 496 aaKnown RBP7.27□□□□□ -1.25
PRPF3-206ENST00000493553 RBMY1CP0DJD4 496 aa7.27□□□□□ -1.25
PRPF3-206ENST00000493553 RBMY1FQ15415 496 aaKnown RBP7.27□□□□□ -1.25
PRPF3-206ENST00000493553 TMEM97Q5BJF2 176 aa7.27□□□□□ -1.25
PRPF3-206ENST00000493553 JPT2Q9H910 190 aa7.27□□□□□ -1.25
PRPF3-206ENST00000493553 CHTOPQ9Y3Y2 248 aaKnown RBP7.27□□□□□ -1.25
PRPF3-206ENST00000493553 NSD1Q96L73 2696 aaPredicted RBP7.27□□□□□ -1.25
PRPF3-206ENST00000493553 SVEP1Q4LDE5 3571 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 MUC4Q99102 2169 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 AGRNO00468 2067 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 SMIM9A6NGZ8 99 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 HERVK_113P61574 105 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 MAJINQ3KP22 176 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 CFAP126Q5VTH2 177 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 UFSP1Q6NVU6 142 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 BOD1L2Q8IYS8 172 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 NEXN-AS1Q8NBZ9 246 aa7.26□□□□□ -1.25
PRPF3-206ENST00000493553 ZMAT5Q9UDW3 170 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms