RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 IFNA1P01562 189 aa7.62□□□□□ -1.19
LRTM1-202ENST00000493075 TAGLN2P37802 199 aaKnown RBP7.62□□□□□ -1.19
LRTM1-202ENST00000493075 MEF2BQ02080 365 aaPredicted RBP7.62□□□□□ -1.19
LRTM1-202ENST00000493075 CENPWQ5EE01 88 aa7.62□□□□□ -1.19
LRTM1-202ENST00000493075 Q6ZNX1 250 aa7.62□□□□□ -1.19
LRTM1-202ENST00000493075 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.62□□□□□ -1.19
LRTM1-202ENST00000493075 NEXN-AS1Q8NBZ9 246 aa7.62□□□□□ -1.19
LRTM1-202ENST00000493075 DAZAP1Q96EP5 407 aaKnown RBP7.62□□□□□ -1.19
LRTM1-202ENST00000493075 BIN3Q9NQY0 253 aa7.62□□□□□ -1.19
LRTM1-202ENST00000493075 KIF25-AS1Q9Y6Z4 181 aa7.62□□□□□ -1.19
LRTM1-202ENST00000493075 A0A087WX48 190 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 RAB19A4D1S5 217 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 C19orf71A6NCJ1 209 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 IGLC6P0CF74 106 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 GNG4P50150 75 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 ZNF56Q15929 161 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 TMEM97Q5BJF2 176 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 KCNIP4Q6PIL6 250 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 VAX2Q9UIW0 290 aa7.61□□□□□ -1.19
LRTM1-202ENST00000493075 MUC21A0A0G2JKD1 596 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 XKRY2A2RUG3 117 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 F2Z2F3 143 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 F5H697 171 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 BCL2P10415 239 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 PKIAP61925 76 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 CACNG7P62955 275 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 Q0VG73 95 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 ATRAIDQ6UW56 229 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 FER1L6-AS1Q8NA97 138 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 OR2D3Q8NGH3 330 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 MED9Q9NWA0 146 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
LRTM1-202ENST00000493075 RBFOX3A6NFN3 312 aa7.59□□□□□ -1.19
LRTM1-202ENST00000493075 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
LRTM1-202ENST00000493075 WFDC2Q14508 124 aa7.59□□□□□ -1.19
LRTM1-202ENST00000493075 WDR73Q6P4I2 378 aa7.59□□□□□ -1.19
LRTM1-202ENST00000493075 Q8N976 141 aa7.59□□□□□ -1.19
LRTM1-202ENST00000493075 FRZBQ92765 325 aa7.59□□□□□ -1.19
LRTM1-202ENST00000493075 IGKV2D-24A0A075B6R9 120 aa7.58□□□□□ -1.2
LRTM1-202ENST00000493075 P01737 135 aa7.58□□□□□ -1.2
LRTM1-202ENST00000493075 SSTP61278 116 aa7.58□□□□□ -1.2
LRTM1-202ENST00000493075 BAALCQ8WXS3 180 aa7.58□□□□□ -1.2
LRTM1-202ENST00000493075 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
LRTM1-202ENST00000493075 DNAJC30Q96LL9 226 aa7.58□□□□□ -1.2
LRTM1-202ENST00000493075 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
LRTM1-202ENST00000493075 H7C1H1 209 aa7.57□□□□□ -1.2
LRTM1-202ENST00000493075 M0QY20 66 aa7.57□□□□□ -1.2
LRTM1-202ENST00000493075 GZMBP10144 247 aa7.57□□□□□ -1.2
LRTM1-202ENST00000493075 C9orf62Q8N4C0 152 aa7.57□□□□□ -1.2
LRTM1-202ENST00000493075 FAM229AH3BQW9 127 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 LECT2O14960 151 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 Q5VSD8 79 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 NTM-AS1Q6ZSK4 140 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 AKAP14Q86UN6 197 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 NUDT11Q96G61 164 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 TPPP3Q9BW30 176 aa7.56□□□□□ -1.2
LRTM1-202ENST00000493075 TRGC1P0CF51 173 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 INAFM2P0DMQ5 153 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 NTF3P20783 257 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 MPV17L2Q567V2 206 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 LYZL1Q6UWQ5 148 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 Q6ZSA8 131 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 CNFNQ9BYD5 112 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 FAM30AQ9NZY2 134 aa7.55□□□□□ -1.2
LRTM1-202ENST00000493075 TRBV25-1A0A075B6N4 114 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 TMEM250H0YL14 139 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 CRPP02741 224 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
LRTM1-202ENST00000493075 MIAQ16674 131 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 C15orf54Q8N8G6 183 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 LYPD6BQ8NI32 183 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 FAT1Q14517 4588 aa7.54□□□□□ -1.2
LRTM1-202ENST00000493075 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.53□□□□□ -1.2
LRTM1-202ENST00000493075 IGHV1-24A0A0C4DH33 117 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 ANGP03950 147 aaKnown RBP7.53□□□□□ -1.2
LRTM1-202ENST00000493075 MGPP08493 103 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 CTRLP40313 264 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 C14orf177Q52M58 125 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 PRR34Q9NV39 138 aa7.53□□□□□ -1.2
LRTM1-202ENST00000493075 K7EN84 100 aa7.52□□□□□ -1.2
LRTM1-202ENST00000493075 NDUFS6O75380 124 aaKnown RBP7.52□□□□□ -1.2
LRTM1-202ENST00000493075 RBX1P62877 108 aa7.52□□□□□ -1.2
LRTM1-202ENST00000493075 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.2
LRTM1-202ENST00000493075 RPP21Q9H633 154 aaKnown RBP7.52□□□□□ -1.2
LRTM1-202ENST00000493075 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.21
LRTM1-202ENST00000493075 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms