RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
SMARCC1-208ENST00000492896 FLNBO75369 2602 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 TRAV4A0A0B4J268 109 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 LINC01549A6NIU2 74 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 RHOHQ15669 191 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 C12orf54Q6X4T0 127 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 ZFP2Q6ZN57 461 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 C3orf56Q8N813 242 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 OR4C5Q8NGB2 326 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 PMCHL2Q9BQD1 86 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 CYSLTR1Q9Y271 337 aa6.59□□□□□ -1.35
SMARCC1-208ENST00000492896 hDV102S1A0JD36 115 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 PLAC8L1A1L4L8 177 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 I3L3M4 83 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 IGHV3-53P01767 116 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 PRSS1P07477 247 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 APOC4P55056 127 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 RIPPLY3P57055 190 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 DEFA6Q01524 100 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 Q6ZN92 141 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 Q6ZTI0 123 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 DNAJC30Q96LL9 226 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 MIEN1Q9BRT3 115 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 NOP10Q9NPE3 64 aaKnown RBP6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 TNFRSF18Q9Y5U5 241 aa6.58□□□□□ -1.36
SMARCC1-208ENST00000492896 JMJD1CQ15652 2540 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 P0DMU3 169 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 FAM231AP0DMU4 169 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 FAM231CP0DMU5 169 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 IGLC3P0DOY3 106 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 ODF1Q14990 250 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 KIR2DL5BQ8NHK3 375 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 OVOL2Q9BRP0 275 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 UQCR10Q9UDW1 63 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 TP53TG1Q9Y2A0 90 aa6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 TEP1Q99973 2627 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-208ENST00000492896 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 SMIM9A6NGZ8 99 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 TSHBP01222 138 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 Q6ZSN1 163 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 ERASQ7Z444 233 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 NEXN-AS1Q8NBZ9 246 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
SMARCC1-208ENST00000492896 TRGV2A0A075B6R0 118 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 A0A087WX48 190 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 GAGE12BA1L429 117 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 K7EQD1 137 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 CIDEAO60543 219 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 GAGE7O76087 117 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 DPM2O94777 84 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 IGKCP01834 107 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 GAGE12FP0CL80 117 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 GAGE12GP0CL81 117 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 GAGE12IP0CL82 117 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 BAALCQ8WXS3 180 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 C14orf144Q96I85 54 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
SMARCC1-208ENST00000492896 ATRQ13535 2644 aa6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 TRBV10-1A0A0K0K1A3 114 aa6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 HNRNPA3P51991 378 aaKnown RBP6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 RPL39P62891 51 aaKnown RBP6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 ZMAT4Q9H898 229 aa6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 X6R8D5 127 aa6.54□□□□□ -1.36
SMARCC1-208ENST00000492896 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 NOTCH3Q9UM47 2321 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 IGIPA6NJ69 53 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 F8VRH5 84 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 PLNP26678 52 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 EMP1P54849 157 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 RPL36AP83881 106 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 DEFB135Q30KP9 77 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 ANKRD39Q53RE8 183 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 RPL36ALQ969Q0 106 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 CHTOPQ9Y3Y2 248 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-208ENST00000492896 IGHV4-30-4P0DP06 118 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 COTL1Q14019 142 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 OXLD1Q5BKU9 147 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 SLC25A34Q6PIV7 304 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 LINC00612Q8N6U2 182 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 PHLDA1Q8WV24 401 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 ZMAT5Q9UDW3 170 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 Q9UF83 564 aa6.52□□□□□ -1.37
SMARCC1-208ENST00000492896 TENM1Q9UKZ4 2725 aa6.51□□□□□ -1.37
SMARCC1-208ENST00000492896 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
SMARCC1-208ENST00000492896 TRGV4A0A0C4DH28 118 aa6.51□□□□□ -1.37
SMARCC1-208ENST00000492896 IGHV3-38A0A0C4DH36 116 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms