RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 DNAH5Q8TE73 4624 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 SMIM9A6NGZ8 99 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 GABARAPH6UMI1 98 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 PDE6DO43924 150 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 NPYP01303 97 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 IGKV1-17P01599 117 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 SRP19P09132 144 aaKnown RBP1.77□□□□□ -2.13
SNX13-209ENST00000492626 OR10J4P0C629 311 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 SNRPGP62308 76 aaKnown RBP1.77□□□□□ -2.13
SNX13-209ENST00000492626 TCTEX1D1Q8N7M0 179 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 TMEM106BQ9NUM4 274 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 APOBP04114 4563 aaKnown RBP1.77□□□□□ -2.13
SNX13-209ENST00000492626 WNK1Q9H4A3 2382 aa1.77□□□□□ -2.13
SNX13-209ENST00000492626 A0A087WWC5 75 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 KANTRA0A1W2PQU2 76 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 ARRDC5A6NEK1 342 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 HLA-DRB1P01911 266 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 PRB2P02812 416 aaPredicted RBP1.76□□□□□ -2.13
SNX13-209ENST00000492626 LINC00313P59037 77 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 ZNF117Q03924 483 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 ACOT6Q3I5F7 207 aaPredicted RBP1.76□□□□□ -2.13
SNX13-209ENST00000492626 BVES-AS1Q5T3Y7 98 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 MINOS1Q5TGZ0 78 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 RPP25LQ8N5L8 163 aaKnown RBP1.76□□□□□ -2.13
SNX13-209ENST00000492626 ZNF676Q8N7Q3 588 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 RPS4Y2Q8TD47 263 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 BCL2L10Q9HD36 194 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 LINC00312Q9Y6C7 94 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 MINOS1-NBL1R4GNA1 71 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 IGKV1-12A0A0C4DH73 117 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 A0A1B0GW64 132 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 C17orf51A8MQB3 221 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 LY6HO94772 140 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 IGKV1D-12P01611 117 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 ZNF728P0DKX0 622 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 PSG4Q00888 419 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 HIST1H1AQ02539 215 aaPredicted RBP1.76□□□□□ -2.13
SNX13-209ENST00000492626 SPATA45Q537H7 98 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 TMEM42Q69YG0 159 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 GLIPR1L1Q6UWM5 242 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 DPPA3Q6W0C5 159 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 SDIM1Q6ZPB5 146 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 EFCAB11Q9BUY7 163 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 TAS2R8Q9NYW2 309 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 TENM2Q9NT68 2774 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 SEC16AO15027 2179 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 ZNF878C9JN71 531 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 K7ERU9 68 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 S1PR2O95136 353 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 CD3DP04234 171 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 RPL7P18124 248 aaKnown RBP1.76□□□□□ -2.13
SNX13-209ENST00000492626 LTC4SQ16873 150 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 CLECL1Q8IZS7 167 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 ZFAND2AQ8N6M9 145 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 OR10P1Q8NGE3 313 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 CARD19Q96LW7 228 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 C20orf78Q9BR46 151 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 DERL1Q9BUN8 251 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 CYSTM1Q9H1C7 97 aa1.76□□□□□ -2.13
SNX13-209ENST00000492626 A0A087WUU8 490 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 IGHV1-18A0A0C4DH31 117 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 ZNF705FA8MVS1 300 aaPredicted RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 TRAPPC2LH3BP13 241 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 OR7C1O76099 320 aaPredicted RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 HAND1O96004 215 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 IFNA1P01562 189 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 ZNF705BP0CI00 300 aaPredicted RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 CGB3P0DN86 165 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 CGB7P0DN87 165 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 EMP1P54849 157 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 FOXI2Q6ZQN5 318 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 OR5C1Q8NGR4 320 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 MYOZ3Q8TDC0 251 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 SNRNP25Q9BV90 132 aaKnown RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 CST11Q9H112 138 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 SLC35B3Q9H1N7 401 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 XAGE1AQ9HD64 81 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 ZNF391Q9UJN7 358 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 PCTPQ9UKL6 214 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 PKIGQ9Y2B9 76 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 TIMM9Q9Y5J7 89 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 SVEP1Q4LDE5 3571 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 TRBV20OR9-2A0A075B6H5 130 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 TRAV9-1A0A075B6T8 112 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 A0A1W2PRE2 83 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 H3BPC8 53 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 NPFFO15130 113 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 CPSF4O95639 269 aaKnown RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 IGHV3-30-3P0DP02 117 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 ZNF93P35789 620 aaPredicted RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 HIST1H4AP62805 103 aaKnown RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 GNG3P63215 75 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 SUPT4H1P63272 117 aaKnown RBP1.75□□□□□ -2.13
SNX13-209ENST00000492626 HSD52Q0P140 79 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 MOBPQ13875 183 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 C2orf91Q6ZV80 131 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 AQP3Q92482 292 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 IMMP2LQ96T52 175 aa1.75□□□□□ -2.13
SNX13-209ENST00000492626 GPER1Q99527 375 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms