RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 H3BRN7 92 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 NUPR1O60356 82 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 ARMS2P0C7Q2 107 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 MORN3Q6PF18 240 aaPredicted RBP3.42□□□□□ -1.86
TRA2B-215ENST00000492417 PATE2Q6UY27 113 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 GPHB5Q86YW7 130 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 THAP8Q8NA92 274 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 UBE2WQ96B02 151 aa3.42□□□□□ -1.86
TRA2B-215ENST00000492417 TRGV1A0A0A0MS02 117 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 IGHV1-24A0A0C4DH33 117 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 SPRY2O43597 315 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 BUB3O43684 328 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 KRTAP1-1Q07627 177 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 DEFB135Q30KP9 77 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 LGALS9BQ3B8N2 356 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 LGALS9CQ6DKI2 356 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 C15orf53Q8NAA6 179 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 C1orf43Q9BWL3 253 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
TRA2B-215ENST00000492417 SMAD5-AS1Q9Y6J3 95 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 NPC2P61916 151 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 V9GYV3 84 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 TRBV19A0A075B6N1 114 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 FNDC10F2Z333 226 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 TRACP01848 142 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PROK1P58294 105 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PRR20EP86478 221 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PRR20CP86479 221 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PRR20DP86480 221 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PRR20BP86481 221 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 PRR20AP86496 221 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 LINC00477Q96M19 166 aa3.41□□□□□ -1.86
TRA2B-215ENST00000492417 TMEM213A2RRL7 107 aa3.4□□□□□ -1.86
TRA2B-215ENST00000492417 TMEM89A2RUT3 159 aa3.4□□□□□ -1.86
TRA2B-215ENST00000492417 K7ERJ3 54 aa3.4□□□□□ -1.86
TRA2B-215ENST00000492417 SLC25A20O43772 301 aa3.4□□□□□ -1.86
TRA2B-215ENST00000492417 NDUFA7O95182 113 aa3.4□□□□□ -1.86
TRA2B-215ENST00000492417 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.86
TRA2B-215ENST00000492417 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.86
TRA2B-215ENST00000492417 IGKV1D-37A0A075B6S9 117 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 PRSS29PA6NIE9 313 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 SIVA1O15304 175 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 IGLV1-40P01703 118 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 WFDC2Q14508 124 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 C12orf74Q32Q52 190 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 WIPF2Q8TF74 440 aaPredicted RBP3.4□□□□□ -1.87
TRA2B-215ENST00000492417 NTN5Q8WTR8 489 aaPredicted RBP3.4□□□□□ -1.87
TRA2B-215ENST00000492417 FAM110AQ9BQ89 295 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 ZMAT4Q9H898 229 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 TRAV25A0A0B4J276 109 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 TRGV4A0A0C4DH28 118 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 INSP01308 110 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 FGF6P10767 208 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 DEFB114Q30KQ6 69 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 CEND1Q8N111 149 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 GATD1Q8NB37 220 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 C8orf49Q96NF6 230 aa3.4□□□□□ -1.87
TRA2B-215ENST00000492417 NIPBLQ6KC79 2804 aaeCLIP3.4□□□□□ -1.875e-6■□□□□ 10.2
TRA2B-215ENST00000492417 PRAC2D3DTV9 90 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 TMEM75Q8N9X5 138 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 CR1P17927 2039 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 TENM4Q6N022 2769 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 F8WDY8 70 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 G3V4G9 280 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 APOC4P55056 127 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 TAL2Q16559 108 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 FAM104BQ5XKR9 115 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 FXYD5Q96DB9 178 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 GFRA4Q9GZZ7 299 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 AGRNO00468 2067 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 ZFHX3Q15911 3703 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 IGHV3-16A0A0C4DH30 117 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 SH2D1AO60880 128 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 FSHBP01225 129 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 CT83Q5H943 113 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 FAM231DQ6ZW35 169 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 ZC2HC1AQ96GY0 325 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 AGPAT4-IT1Q9H0P7 198 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 PLA2G2EQ9NZK7 142 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 PRO1854Q9UHT4 67 aa3.39□□□□□ -1.87
TRA2B-215ENST00000492417 F5H768 121 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 INS-IGF2F8WCM5 200 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 K7EMT4 169 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 RBX1P62877 108 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 KLF5Q13887 457 aaPredicted RBP3.38□□□□□ -1.87
TRA2B-215ENST00000492417 PRIMA1Q86XR5 153 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 ANKRD29Q8N6D5 301 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 ZNF747Q9BV97 191 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 MRPL35Q9NZE8 188 aaKnown RBP3.38□□□□□ -1.87
TRA2B-215ENST00000492417 MYMXA0A1B0GTQ4 84 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 WI2-2373I1.2A0A1W2PRP0 233 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 SMIM27A0A1W2PRY6 76 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 CRPP02741 224 aa3.38□□□□□ -1.87
TRA2B-215ENST00000492417 INSL3P51460 131 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms