RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NIT1Q86X76 327 aa5.49□□□□□ -1.53
LSM2-213ENST00000491421 RMI2Q96E14 147 aa5.49□□□□□ -1.53
LSM2-213ENST00000491421 TMEM70Q9BUB7 260 aa5.49□□□□□ -1.53
LSM2-213ENST00000491421 MANBALQ9NQG1 85 aa5.49□□□□□ -1.53
LSM2-213ENST00000491421 GNG13Q9P2W3 67 aa5.49□□□□□ -1.53
LSM2-213ENST00000491421 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
LSM2-213ENST00000491421 TRBV7-3A0A075B6L6 115 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 A0A087WX48 190 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 MUC21A0A0G2JKD1 596 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 MUC21A0A140T8X8 626 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 LECT2O14960 151 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 SNAI2O43623 268 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 RPL35P42766 123 aaKnown RBP5.48□□□□□ -1.53
LSM2-213ENST00000491421 RAB5CP51148 216 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 RAB4BP61018 213 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 UBE2D3P61077 147 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 UBE2D2P62837 147 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 CCL20P78556 96 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 WFDC2Q14508 124 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 EIF5AL1Q6IS14 154 aaKnown RBP5.48□□□□□ -1.53
LSM2-213ENST00000491421 DERL1Q9BUN8 251 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 KLK12Q9UKR0 248 aa5.48□□□□□ -1.53
LSM2-213ENST00000491421 IGKV2D-24A0A075B6R9 120 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 TRAV1-1A0A0B4J248 108 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 F5H697 171 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 TEX46H3BTG2 121 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 SMR3BP02814 79 aaPredicted RBP5.47□□□□□ -1.53
LSM2-213ENST00000491421 OR5AL1P0C617 328 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 INAFM2P0DMQ5 153 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 SSTP61278 116 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 ELOBQ15370 118 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.47□□□□□ -1.53
LSM2-213ENST00000491421 NEXN-AS1Q8NBZ9 246 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 OR10G8Q8NGN5 311 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 BAALCQ8WXS3 180 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 C11orf52Q96A22 123 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 UBE2WQ96B02 151 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 CHCHD7Q9BUK0 85 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 SSBP4Q9BWG4 385 aaPredicted RBP5.47□□□□□ -1.53
LSM2-213ENST00000491421 HERC1Q15751 4861 aa5.47□□□□□ -1.53
LSM2-213ENST00000491421 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.46□□□□□ -1.54
LSM2-213ENST00000491421 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 TMEM262E9PQX1 116 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 FAM229AH3BQW9 127 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 SMIM17P0DL12 118 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 CENPWQ5EE01 88 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 DAZAP1Q96EP5 407 aaKnown RBP5.46□□□□□ -1.54
LSM2-213ENST00000491421 DNAJC30Q96LL9 226 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 AP1S3Q96PC3 154 aa5.46□□□□□ -1.54
LSM2-213ENST00000491421 RBFOX3A6NFN3 312 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 PDE6DO43924 150 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 IFNA1P01562 189 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 C1QBP02746 253 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 GZMBP10144 247 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 GNG4P50150 75 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 SULT1A2P50226 295 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 RPS20P60866 119 aaKnown RBP5.45□□□□□ -1.54
LSM2-213ENST00000491421 MEF2BQ02080 365 aaPredicted RBP5.45□□□□□ -1.54
LSM2-213ENST00000491421 Q0VG73 95 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 TCTE3Q8IZS6 198 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 Q8N976 141 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 FER1L6-AS1Q8NA97 138 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 OR2D3Q8NGH3 330 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 FAM30AQ9NZY2 134 aa5.45□□□□□ -1.54
LSM2-213ENST00000491421 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
LSM2-213ENST00000491421 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 RAB19A4D1S5 217 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 C5orf52A6NGY3 159 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 IGLV2-8P01709 118 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 P01737 135 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 CRPP02741 224 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 MGPP08493 103 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 PKIAP61925 76 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 MPV17L2Q567V2 206 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 TMEM97Q5BJF2 176 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 ATRAIDQ6UW56 229 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 C15orf54Q8N8G6 183 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 SMIM12Q96EX1 92 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 CHCHD5Q9BSY4 110 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 MED9Q9NWA0 146 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 KIF25-AS1Q9Y6Z4 181 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
LSM2-213ENST00000491421 C19orf71A6NCJ1 209 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 USP17L23D6RBM5 183 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
LSM2-213ENST00000491421 IGLC6P0CF74 106 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 BCL2P10415 239 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 CACNG7P62955 275 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 LINC01620Q4KN68 170 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 Q6ZSA8 131 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 SLC51BQ86UW2 128 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 OCC1Q8TAD7 63 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 BIN3Q9NQY0 253 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 VAX2Q9UIW0 290 aa5.43□□□□□ -1.54
LSM2-213ENST00000491421 DMBT1Q9UGM3 2413 aaPredicted RBP5.42□□□□□ -1.54
LSM2-213ENST00000491421 TRBV20OR9-2A0A075B6H5 130 aa5.42□□□□□ -1.54
LSM2-213ENST00000491421 H7C1H1 209 aa5.42□□□□□ -1.54
LSM2-213ENST00000491421 M0QY20 66 aa5.42□□□□□ -1.54
LSM2-213ENST00000491421 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
LSM2-213ENST00000491421 ENHOQ6UWT2 76 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms