RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RPL39P62891 51 aaKnown RBP5.45□□□□□ -1.54
NPHP3-208ENST00000490993 LINC01006Q8NI28 216 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 NDUFA12Q9UI09 145 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 NPSP0C0P6 89 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 HTN3P15516 51 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 MALP21145 153 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 DAD1P61803 113 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 UNC80Q8N2C7 3258 aa5.45□□□□□ -1.54
NPHP3-208ENST00000490993 TRBV20-1A0A075B6N2 111 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 C12orf74Q32Q52 190 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 RBMY1BA6NDE4 496 aaKnown RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 RBMY1EA6NEQ0 496 aaKnown RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 RBMY1DP0C7P1 496 aaKnown RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 RBMY1A1P0DJD3 496 aaKnown RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 RBMY1CP0DJD4 496 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 NAA38Q9BRA0 125 aaKnown RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 LINC01546A6NGU7 62 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 FAM19A4Q96LR4 140 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 HIVEP3Q5T1R4 2406 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 IGKV2-29A2NJV5 120 aaPredicted RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 RS1O15537 224 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 FSHBP01225 129 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 POLR2KP53803 58 aaKnown RBP5.44□□□□□ -1.54
NPHP3-208ENST00000490993 TEX48A0A1B0GUV7 120 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 TAX1BP3O14907 124 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 C18orf65Q6ZTR6 163 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 Q6ZVH6 145 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 PRIMA1Q86XR5 153 aa5.44□□□□□ -1.54
NPHP3-208ENST00000490993 C3orf56Q8N813 242 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 ATXN8Q156A1 80 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 LINC00467Q9BRT7 94 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 ZMAT4Q9H898 229 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 F8W1H4 67 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 CRYGDP07320 174 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 CFAP126Q5VTH2 177 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 A0A0J9YXV3 536 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 PTH2Q96A98 100 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 PRO1854Q9UHT4 67 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
NPHP3-208ENST00000490993 SPG11Q96JI7 2443 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 SMIM9A6NGZ8 99 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 CRPP02741 224 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 EDN2P20800 178 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 SFTA2Q6UW10 78 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 SZT2Q5T011 3432 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 LINC00158P58513 81 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 Q6ZQT7 251 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 CLUHP3Q96NS8 147 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 DNAL4O96015 105 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 CKS1BP61024 79 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 HERV-K104P63124 156 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 GAGE6Q13070 117 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 SPINK8P0C7L1 97 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 IFITM1P13164 125 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 SH2D6Q7Z4S9 175 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
NPHP3-208ENST00000490993 IGLV2-18A0A075B6J9 118 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 H7C423 109 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 PAX4O43316 350 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 C6orf226Q5I0X4 101 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 HIST2H2BCQ6DN03 193 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 TINCRA0A1B0GVN0 87 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 OVOL2Q9BRP0 275 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 A0A096LNJ9 63 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 LY6G6DO95868 133 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 IGLL5B9A064 214 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 TM2D2Q9BX73 214 aa5.41□□□□□ -1.54
NPHP3-208ENST00000490993 F5H768 121 aa5.4□□□□□ -1.54
NPHP3-208ENST00000490993 K7ERJ3 54 aa5.4□□□□□ -1.54
NPHP3-208ENST00000490993 FGF6P10767 208 aa5.4□□□□□ -1.54
NPHP3-208ENST00000490993 FXYD2P54710 66 aa5.4□□□□□ -1.54
NPHP3-208ENST00000490993 TSHBP01222 138 aa5.4□□□□□ -1.54
NPHP3-208ENST00000490993 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.54
NPHP3-208ENST00000490993 CACNA1AO00555 2505 aa5.4□□□□□ -1.54
NPHP3-208ENST00000490993 IGHV1-58A0A0C4DH39 117 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 K7EP13 123 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 CCL25O15444 150 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 OCIAD2Q56VL3 154 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 ATP6V0E2Q8NHE4 81 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 FAM110AQ9BQ89 295 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 TTTY13Q9BZ97 58 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 A0A096LNT2 108 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 SLC25A29Q8N8R3 303 aa5.4□□□□□ -1.55
NPHP3-208ENST00000490993 IGLV4-3A0A075B6K6 122 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 CRLF1O75462 422 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 C2orf91Q6ZV80 131 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 MRAPQ8TCY5 172 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 HHLA3Q9XRX5 114 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 XIRP2A4UGR9 3374 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 A0A0U1RRA0 63 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 NPC2P61916 151 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 AMTNQ6UX39 209 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 Q6ZTI0 123 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 VSIG2Q96IQ7 327 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 TRBV6-4A0A1B0GX49 114 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 ATP5G1P05496 136 aa5.39□□□□□ -1.55
NPHP3-208ENST00000490993 ODF3L2Q3SX64 289 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms