RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RPL12P30050 165 aaKnown RBP5.21□□□□□ -1.58
USP39-216ENST00000490193 CDC34P49427 236 aaPredicted RBP5.21□□□□□ -1.58
USP39-216ENST00000490193 H2BFSP57053 126 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 PKIAP61925 76 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 CNBPP62633 177 aaKnown RBP5.21□□□□□ -1.58
USP39-216ENST00000490193 SUMO1P63165 101 aaKnown RBP5.21□□□□□ -1.58
USP39-216ENST00000490193 MPV17L2Q567V2 206 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 FAM74A4Q5TZK3 123 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 C15orf54Q8N8G6 183 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 OR11H4Q8NGC9 324 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 SMIM3Q9BZL3 60 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 A0A087WWL8 130 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 B4DEV8 164 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 KRBOX1C9JBD0 128 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 TMEM262E9PQX1 116 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 MPC2O95563 127 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
USP39-216ENST00000490193 GCHFRP30047 84 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 RGS21Q2M5E4 152 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 COX8CQ7Z4L0 72 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 CLRN3Q8NCR9 226 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 LINC01600Q96MT4 127 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 WFDC1Q9HC57 220 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 TMEM167BQ9NRX6 74 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 ARL2-SNX15V9GYD0 113 aa5.2□□□□□ -1.58
USP39-216ENST00000490193 A0A1W2PRE2 83 aa5.19□□□□□ -1.58
USP39-216ENST00000490193 CRIP1P50238 77 aa5.19□□□□□ -1.58
USP39-216ENST00000490193 PRR27Q6MZM9 219 aa5.19□□□□□ -1.58
USP39-216ENST00000490193 RAB24Q969Q5 203 aa5.19□□□□□ -1.58
USP39-216ENST00000490193 NDUFA13Q9P0J0 144 aa5.19□□□□□ -1.58
USP39-216ENST00000490193 PHLDA3Q9Y5J5 127 aa5.19□□□□□ -1.58
USP39-216ENST00000490193 A0A087WYN8 130 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 TRAV34A0A0B4J273 112 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 PCP4L1A6NKN8 68 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 PTTG1O95997 202 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 CXorf1O96002 111 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 RAB4BP61018 213 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 TMEM97Q5BJF2 176 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 Q86TA4 180 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 ZFP82Q8N141 532 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 NEXN-AS1Q8NBZ9 246 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 SPACA4Q8TDM5 124 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 PSMG3Q9BT73 122 aaPredicted RBP5.18□□□□□ -1.58
USP39-216ENST00000490193 PLAC8Q9NZF1 115 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 VAX2Q9UIW0 290 aa5.18□□□□□ -1.58
USP39-216ENST00000490193 IGHV3-64A0A075B6Q5 118 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 GRIFINA4D1Z8 144 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 M0R036 132 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 M0R381 172 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 PHOX2AO14813 284 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 SH2D1AO60880 128 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 MBP02144 154 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 TPT1P13693 172 aaKnown RBP5.17□□□□□ -1.58
USP39-216ENST00000490193 RBX1P62877 108 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 SERF2P84101 59 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 NTM-AS1Q6ZSK4 140 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 CHCHD5Q9BSY4 110 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 DPH3P1Q9H4G8 78 aa5.17□□□□□ -1.58
USP39-216ENST00000490193 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.16□□□□□ -1.58
USP39-216ENST00000490193 A0A0J9YXV3 536 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 RAB19A4D1S5 217 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 PEX7O00628 323 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 SLPIP03973 132 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 FAM162BQ5T6X4 162 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 LINC00299Q6ZSB3 139 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 LINC00269Q8N2A0 174 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.16□□□□□ -1.58
USP39-216ENST00000490193 C7orf33Q8WU49 177 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 HIST1H2BAQ96A08 127 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 ZFP30Q9Y2G7 519 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 KIF25-AS1Q9Y6Z4 181 aa5.16□□□□□ -1.58
USP39-216ENST00000490193 TRAV8-4A0A0B4J246 113 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 hDV102S1A0JD36 115 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 INMT-MINDY4F8WBC2 141 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 P01737 135 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 CXCL1P09341 107 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 GZMBP10144 247 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 ATP6V0CP27449 155 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 REG3AQ06141 175 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 IQCJQ1A5X6 159 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 CLPSL2Q6UWE3 100 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 LINC00518Q8N0U6 118 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 MARVELD1Q9BSK0 173 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 NKX6-2Q9C056 277 aaPredicted RBP5.15□□□□□ -1.59
USP39-216ENST00000490193 ACTR3CQ9C0K3 210 aaPredicted RBP5.15□□□□□ -1.59
USP39-216ENST00000490193 TNFSF18Q9UNG2 199 aa5.15□□□□□ -1.59
USP39-216ENST00000490193 TRBV25-1A0A075B6N4 114 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 TRBV6-1A0A0K0K1D8 114 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 GAS8-AS1O95177 125 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 SNAPINO95295 136 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 IFNA7P01567 189 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 PRR3P79522 188 aaKnown RBP5.14□□□□□ -1.59
USP39-216ENST00000490193 ZNF56Q15929 161 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 DPH3Q96FX2 82 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 FMC1Q96HJ9 113 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 AP5S1Q9NUS5 200 aa5.14□□□□□ -1.59
USP39-216ENST00000490193 TMSB15BA0A087X1C1 80 aa5.13□□□□□ -1.59
USP39-216ENST00000490193 A0A1B0GUV1 79 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms